Pyrus communis (pear): 137734094
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Entry
137734094 CDS
T10779
Name
(RefSeq) regulator of nonsense transcripts UPF2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
pcox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137734094
03015 mRNA surveillance pathway
137734094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137734094
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137734094
mRNA cycle factors
P-body specific factors
137734094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Glycos_transf_N
Motif
Other DBs
NCBI-GeneID:
137734094
NCBI-ProteinID:
XP_068329471
LinkDB
All DBs
Position
5:complement(22072288..22083337)
Genome browser
AA seq
1185 aa
AA seq
DB search
MDHHEEECRAGNEPHGKQDDEEAAARLEEIKKSIEAKMALRQSNLNPERPDTGFLRTLDS
SIKRNTAVIKKLKQINEEQREGLMDDLRVVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC
SLLHQRYKDFSPTLLQGLLKVFFPGKSGDDLEADKNLRAMKKRSTLKLLLELFFVGVIED
GGIFVNIIKDLASGEHLKDRDTTQTNLTLLASFARQGRMFLGLPLAGPEIHEEFFKGLNI
TTDQKKFFRKAFQTYYAAAAELLQSEHTSLRQMEHENAKILNAKGELSDESVSSYEKLRK
SYEHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDASSPVAGKDSSALEAIWDDEDTR
AFYECLPDLRAFVPAVLLGEAESKSSDQSAKTQEQPTEPALESDQTQQITEDTGEASADV
GALQEAKSTEKGKDKEEKDKDKIKDPDKEKADRKVENDKEKLKSIEGTNLDALLQRLPGC
VSRDLIDQLTVEFCYLNSKANRKKLVRALFNVPRTSLELLAYYSRLVATLSTCMKDVSSM
LLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFSHHN
IDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPE
RSARVTKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWGECEPYLLKCFLKVHKGKY
GQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRLGLELNEYGMQQRRIAHMRFLGELYNY
EHVDSSVIFETLYLVLAFGHGTPEQDVLDPPEDCFRMRMVITLLETCGHYFDRGSSKRKL
DRFLMHFQRYILSKGVLPLDVEFDLQDLFADLRPNMARYSSIEEVNAALLELEERDRTVS
IEKHSDTEKPSRRNTSDEMSVNGKSIVNGTGENGVVHGNLGDSDSDSGSGTIDRDRHNEE
GLGEENHDGGSDSDEDDDDGGGPASDEDDEVHVRQRVAEVDPQEAEKFELDLKAVMQESM
EQRRLELRGRPTLNMMIPMNVFEGSTKDHHGRGVGGESGDEALDEESGGSKEVQVKVLVK
RGNKQQTKQMYIPRDCSLIQSTKQKEAEELEEKQDIKRLVLEYNDREEEELNGLGNQTLN
YMQSGGNRLAGRGSTWEGASGRGGGARHRYHSSYSGGGAFYSRKK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccatgaggaggaatgccgtgctggcaatgaacctcatgggaagcaagatgat
gaggaagctgctgctaggcttgaggaaatcaagaaatctattgaggcaaagatggctctt
cgtcaaagcaatctgaaccctgagcggcctgatacaggattccttaggacactggattct
agcattaaacgcaacacagcggttattaaaaaactgaagcagataaatgaagagcagcgg
gaagggttgatggatgacttgagagttgtcaacctgagcaaatttgtcagtgaagctgtt
actgctatttgtgatgccaagcttagatcgtcagacatacaagcagcagtccagatctgc
tctctgctccatcaaaggtacaaagacttctccccaactctgcttcaaggtcttttgaaa
gtcttctttccggggaagtctggggatgacttagaagcagacaagaacttgagggccatg
aagaagcgaagcactttgaaactccttttggaacttttctttgttggagttatagaagat
ggtggtatttttgtgaatatcattaaggatcttgccagtggagaacacttaaaggatcgg
gatactactcagacaaatttgactcttcttgctagttttgctcgtcagggaagaatgttt
cttggccttccacttgctgggccagaaattcatgaagagttttttaagggccttaatatc
acgacagatcaaaagaaatttttcaggaaggcatttcaaacatattatgctgctgctgca
gaactgctgcaatctgagcatacttcacttcgccaaatggagcatgaaaatgctaaaatc
cttaatgctaaaggagagctcagtgatgaaagtgtctcatcatacgagaagctgcggaaa
tcttatgaacatttgtaccgcaatgtctcatctttagcagaagcacttgatatgcaaccc
ccagtaatgccagaggatggccacacaacgagggttactagtggggaggatgcttcatct
cctgttgctggaaaggattcttcggcactcgaagccatatgggatgatgaagatacaagg
gctttctatgaatgcttaccagatcttagagcatttgttccggcagtattattgggagaa
gcagagtctaaaagcagtgatcaatctgcaaagacccaggaacaaccaactgaacccgca
cttgaatcagatcaaactcaacaaattacagaagatactggagaggcttctgcagatgtt
ggtgctttacaagaggccaaaagcacagagaaaggaaaggacaaagaagaaaaagataaa
gacaagatcaaagatccagacaaagagaaagctgacagaaaagtagagaatgacaaagag
aagctcaaaagtattgaagggacaaatttggatgctttactgcagaggcttcctggttgc
gtgagccgtgatcttattgatcagttgactgtggagttttgttatttaaattcaaaagca
aatcggaaaaagcttgtgagggcattatttaatgtccctagaacatcattggagctacta
gcttactactcgcgtttggttgctacactctcaacttgtatgaaggacgtctcatccatg
ctcctagcgatgttggaagaagagttcaacttcttaattaataaaaaggaccaaatgaac
attgaaacgaagattaggaacattagatttattggagaactctgcaagtttaagattgca
ccagctggtcttgtctttagttgtttgaaggcttgtttggatgatttcagtcatcataac
attgatgttgcttgcaatcttcttgagacttgtgggcgttttctgtatcggtctcctgaa
actactgtgcggatggctaacatgttggaaatattaatgcgattgaagaacgtaaaaaat
ttagaccctcggcacagcacccttgttgaaaatgcttactacctatgcaaaccacctgag
agatctgcacgggtcactaaagtccgtcctccattgcatcagtatataagaaagttgcta
ttctcagatcttgataagtctaccatagagcatgtgctcaggcaactgcgtaaattacca
tggggtgaatgtgagccgtatcttttaaaatgctttctgaaggttcacaaagggaagtat
ggtcagatccacttgattgcttctctcaccgctggtttgagccgctatcatgatgaattt
gctgtatctgttgttgatgaggttctagaggagatacggcttggcctagaattaaatgag
tatgggatgcagcaaagacggattgcccatatgcgatttttaggagagctatacaactat
gagcatgtagattcttctgttatttttgaaactctgtacttggttcttgcctttggccat
ggcacaccagagcaagatgtactggatccaccagaagattgtttccgcatgaggatggtt
attactcttcttgaaacctgcgggcactactttgaccgaggctcttccaagaggaaactt
gatcgattcttgatgcactttcagagatatatactaagtaaaggtgtactaccgcttgat
gtggaatttgacttacaggacttatttgctgatctacgccccaacatggctcggtactct
tccattgaagaagttaatgcagctcttttagaacttgaggagcgtgatcgtactgtctcc
attgagaagcactctgacactgaaaagccttcaaggaggaatacctccgatgaaatgtca
gtgaatggaaagagtattgtaaatggaaccggggaaaatggtgtagttcatggaaacctt
ggagatagtgacagtgattcgggaagtggcaccattgatcgagatagacataatgaagaa
ggattgggtgaagagaatcatgatggtggatctgacagtgacgaggatgatgatgatggt
ggtggaccggcatccgatgaggacgatgaagtccatgtcagacagagggttgctgaggtc
gaccctcaagaagcagaaaagtttgagctggatctcaaggctgttatgcaggaaagcatg
gagcaacgtaggctagagctgagaggccgaccaacattaaacatgatgataccgatgaat
gtgtttgaggggtccaccaaggaccatcatggaagaggggttggaggggaaagtggagat
gaggcattggatgaagagtctggaggaagcaaggaggtccaggtgaaagttcttgtcaag
cgtggtaacaagcaacaaacaaagcagatgtacatccctcgggattgctcacttatccag
agtacgaaacagaaagaagcagaagagcttgaagagaaacaagacatcaagaggttggtt
ttggaatacaatgacagagaagaggaggagcttaatggattggggaaccagactctgaac
tatatgcagagtggcggtaatagacttgctggccgtggcagcacttgggaaggagctagc
ggtagaggtggtggagcacgtcatagatatcacagtagttattccggtgggggagctttc
tacagcaggaaaaagtaa
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integrated database retrieval system
