Pyrus communis (pear): 137734711
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Entry
137734711 CDS
T10779
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE-like
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pcox Pyrus communis (pear)
Pathway
pcox03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137734711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcox03009
]
137734711
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137734711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Utp13
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_VPS8
WDR54
PROPPIN
Beta-prop_ACSF4
Tricorn_2nd
Nbas_N
WD40_like
RAB3GAP2_N
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
137734711
NCBI-ProteinID:
XP_068330076
LinkDB
All DBs
Position
5:29740374..29746267
Genome browser
AA seq
871 aa
AA seq
DB search
MASLPLKKNYRCVPSLQQFYSGGPFAVSSDGSFIACKCGESIKIVDSSNASIRSTIEGDS
DEVTALALSPDNRLLFSAGHSRQIRIWDLSTLKCVRSWKGHEGPVMGMSCHPSGGLLATA
GADRKVLVWDVDGSFCTHYFKGHKGVVSSVLFHPDPTQQLLFSASDDTNVHVWDLLTKKC
VATLNAHDSTVTSMALSEDGWTLLTAGRDKVVILWDLHDYSCMKTVTTYEVLEAVCAIHS
GTPLSSYLGSCKKPCGKKSGLPEICFITVGDRGIVRIWNSEGAVCLYEQKSSDVTLSSDV
DQLNRGFTAAVMLPSDKGFLCVTADQEFLLYSPIKLPEGTLEFELSKRLVGYNDEIVDMK
FVGDEEQFLAVATNLEQVRVYDIASMSCSYVLAGHTGIVLCLDTCVSSCGKPLIVTGSKD
NTVRLWDSASKCCLGLGIGHMGGIGAIAFSKKRKDFFVSGSSDRTLKVWSLDGLPDNAEK
PVNLKAKAGVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVPVVVLKGHKRGVW
SVEFSPVDQCVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGTQFISSGADG
LVKLWMVKTDECIATYDQHDDKVYALAVGKKTEMLATGSSDTVINMWYDCTASDKEEAFR
REEEGVLKNQELENAVLDADFSKAIQVAFELRRPHKLYQCFSEIWRKRETEKQMEKALLA
LGEEEMRLLFEYVREWNTKPKLCHVAHFVLFKVFNILSPTKINEIKGIGEILEGLLSYSQ
RHFSRMDRHETNTYLVNYTLTGMSVIEPETDTIVLQDKSLMHSAADDENGTLINVPEDEE
RKTSERLKETAATKKRKSKKSKDGSSKKVKA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctacctctgaagaagaactaccggtgcgtgccatctctgcagcagttctac
tccggcggtcccttcgccgtctcatccgacggctcattcatcgcctgcaagtgcggtgaa
tccattaagatcgtggattcatcgaacgcctcgattcggtctaccattgaaggcgactca
gatgaagttaccgcgttggccctcagccccgacaacaggctgctcttctccgccggtcac
agtcgccaaattaggatttgggacctctccaccttgaagtgcgtgcgttcttggaagggt
catgaggggccagttatgggaatgtcttgtcacccgtctggtggattgcttgcgactgcc
ggagctgataggaaggttcttgtttgggatgttgatggcagcttttgcactcattacttt
aagggccataaaggggtcgtttctagtgttctcttccatcctgatcctactcaacaactt
cttttctccgcaagcgatgatacaaatgtgcatgtttgggacctattaaccaagaagtgc
gttgcgacacttaatgcgcatgactcaacagtaacttctatggcactgtctgaagacgga
tggactttgctcacagctggaagagataaggttgtaatcttgtgggaccttcatgactat
agctgcatgaagactgtaacaacatatgaggttcttgaagctgtgtgtgcaatccattct
ggaactccattatcatcctatttgggttcctgcaagaagccttgtgggaagaaaagtgga
ttacctgaaatttgctttataacagttggtgaccgtgggattgtacggatttggaattct
gaaggtgcagtttgcctgtatgagcaaaagtcctcagatgttactctatcttcagatgtg
gatcaattaaataggggtttcaccgcagctgtcatgcttccttcagataaagggtttctt
tgtgtgactgctgatcaggagttccttttatattccccaattaagttgccagaggggacg
ctggaatttgaattgagcaaaagacttgtaggttacaacgatgagattgtggatatgaag
tttgtcggagatgaggaacaatttcttgctgttgccacaaatcttgaacaggtacgagta
tatgacattgcatccatgtcatgttcgtacgtattggcaggtcataccggaattgttcta
tgccttgacacctgtgtatcaagttgtggaaaaccacttattgtgactggaagcaaagac
aacactgttcggttgtgggattcagcaagcaaatgttgccttggtcttggcataggtcat
atgggaggtattggagctattgctttctcaaaaaagcggaaagacttcttcgttagtggt
agtagtgatcgtaccctcaaggtgtggagtttggatggtcttccagacaatgcggaaaaa
ccagtgaatctgaaagcaaaggccggtgtagcggcccacgataaggatattaattcagta
gctgttgcaccaaatgatagtttagtttgtagcggctcacaggatcgcactgcttgtgta
tggaggcttccggatcttgtaccagttgttgtacttaagggtcataaaaggggagtttgg
tctgtagagttctctccagttgatcaatgtgttataacggcttctggtgataaaacaata
aagatatggtccatatctgatggttcatgcttgaaaacatttgaagggcatacatcaagt
gtattaagagcatcatttcttactcgtggaacccaatttatttcttcaggtgctgatggg
ttggtaaaactgtggatggtcaaaactgatgaatgcattgctacatatgatcagcatgat
gacaaggtttatgccttggctgtcggaaaaaagacagaaatgcttgcaactggcagcagc
gatactgtcatcaatatgtggtatgattgtactgcttccgataaagaggaagcttttcgt
agggaggaggaaggtgttttaaagaatcaagaactagaaaatgctgtattagatgctgac
ttttctaaagcaattcaagtcgcatttgagcttcgcaggcctcataagctttatcagtgc
ttttctgaaatctggaggaagagagaaactgaaaagcagatggagaaagcccttcttgcc
ctcggcgaggaagagatgaggctactatttgaatatgttcgagaatggaatacaaagcca
aagctctgtcatgttgcacactttgtgcttttcaaagttttcaacatcctcagtccaaca
aagattaatgagataaaaggcattggggaaatccttgaaggtctcctctcgtattctcag
aggcattttagcagaatggacaggcacgaaacaaacacgtatttggtgaactacactctg
actggaatgtcagtcattgaaccagagacagatacaatagtattgcaggacaagtcgttg
atgcactctgctgcggacgatgagaatgggacgttaataaacgtacctgaagatgaggag
cgaaagacctctgagcggttgaaagaaacagcagcgacgaaaaaacggaagtcaaagaaa
tcgaaagatggatccagtaagaaagttaaggcatag
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