Pyrus communis (pear): 137734743
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Entry
137734743 CDS
T10779
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137734743
Transcription machinery [BR:
pcox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137734743
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
DUF755
Motif
Other DBs
NCBI-GeneID:
137734743
NCBI-ProteinID:
XP_068330118
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Position
5:28269659..28273146
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AA seq
544 aa
AA seq
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MCGCRICAQIKLFHSSLGLLLRELGMGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVA
FKTDESNKTALVAPQGKIPLPIETRKKLQKRIGKARKLAKSVKSTATDVAAPCTTLEVDY
NEAAAKLENLYKRSPEIEADVDVEDADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSK
TKKAKRLNLDKRVALKWNKDEKVVSSVQMRKDQKNEMEKIEELVREYSASTDLVSLDWKK
MKIPPVLTSSEHAWLFKLMQPMKGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHF
EVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFR
LSTYGLYWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKV
GISPERYHEVMRASKPVSSLHSRHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVL
DSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLR
RYIV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggttgcagaatttgtgcacaaataaagctctttcactcatcgcttggactactt
ctgagggaacttggcatgggagttgtgacagtttcaacctcagcggcaaggactccgtta
ggattgagcacaaaatcgacaagtcagagatctccattcagaaagccgtggatagttgcg
tttaaaacagatgaatccaataagacggcattagttgcaccccagggaaaaatacctttg
cctatagaaacacgaaagaagctccaaaagagaatagggaaagccagaaaactcgcgaaa
agtgtgaaatctactgctactgatgtagctgctccgtgtactactttggaagtggattac
aatgaagccgctgccaagctggaaaacttatacaagcgtagccctgagattgaagctgat
gtggatgtggaagatgcagatggcttgttgaggaggggtcgcaaaaggaggaagaagact
agcgaaagcgatcatgagaaagaagagaagagaacaagtgatattgtggttagaagcaag
acaaagaaggcgaaaagattgaatcttgataaaagggttgcattgaaatggaacaaggac
gagaaagtggtttcttcggttcaaatgaggaaagatcaaaagaacgaaatggagaagatt
gaggagctggttagggagtattcggcttcaactgatctggtcagtttggactggaaaaag
atgaagattcctccggttctcacttcttcagagcatgcttggttgttcaagctaatgcaa
cctatgaagggtctccatgaagtgagagagcaattacaaaaagatttggggacagaacca
accaacggcgaattggctgaggcgacaaacatgagtgtggttcaagtgaaaaaacatttc
gaagttggtcgagctgcacgaaacaagctcatcaagcacaatctccgacttgtgttattc
gtcattaataaatattttcaagactttgcaaatggtccaaaatttcaagacctgtgccag
gcaggagtaagggggcttattacggcaattgatcgctttgaaccaaaaagaagttttcgg
ctttccacatatggtctgtactggatcaggcatgccatcatacgttccatgacagtctca
agctttactcgtgtttcatttggccttgagtcggttagggcggaaattcaaaaggccaag
cttgagatgatgttttcgctcaaaaggatgccaactgacgaagagataatcgaaaaagtt
ggaatttcgccagagaggtaccatgaagtaatgagggcctcaaaacccgtttcctctctt
cattcaaggcatgcaaccacacaagaggagtatatcaacggtattactgacgtcgatggt
gttgaaggtgataaccggcggaaacctgctcttctcaggcttgctattgatgatgtgctt
gattccctgaagccgaaagaaagcttggtgatcagacagagatacgggcttgatggtaag
ggggatagaacattaggagagattgctggaaacttaaatatttcacgagaaatggttcga
aagcatgaagtcaaggccctcatgaagctcaaacatccagctcgagtagattatcttcgc
agatacatagtctaa
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