Entry |
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Name |
(RefSeq) clathrin heavy chain 2-like
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KO |
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Organism |
pcox Pyrus communis (pear)
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Pathway |
pcox05100 | Bacterial invasion of epithelial cells |
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Brite |
KEGG Orthology (KO) [BR:pcox00001]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137734850
04142 Lysosome
137734850
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137734850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:pcox04131]
137734850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:pcox04147]
137734850
Membrane trafficking [BR:pcox04131]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
137734850
Exosome [BR:pcox04147]
Exosomal proteins
Proteins found in most exosomes
137734850
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
5:24624984..24635674
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AA seq |
1705 aa
MAAANAPITMKEALTLPSVGINPQFITFTHVTMESDKYICVRETSPQNSIVIIDMSMPMQ
PLRRPITADSALMNPNSKILALKAGVQGTTQDHLQIFNIEMKAKLKSHLMPEQIVFWKWI
TPKMLGLVTQTTVYHWSIEGESEPVKVFERTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNLQLFSVDQQRSQALEAHAASFAQYKVPGNENSSTLISFATKTLNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFNDDFPVAMQMSHKYSLIYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTTEASSVGGFYAVNRRGQVLLATINEQTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYSEQLGVDQCMKLFEQFK
SYEGLYFFLGSFLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
GNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDEDLWGKVLDPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRASEDADVYHDLVKYLLMVRQKVREPKVDSELIYAYAKIDRLADI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFANRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLKEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYERLRESIDL
HDSFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIGLSKKDKLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDIVLELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDKIEAQKEIKAKEQEDKEVIAQQNMYAQLLPLALPAPPIPGMSGGMGGGYA
PPPPMGGMPPMGMPPYGMPPMGSSY |
NT seq |
5118 nt +upstreamnt +downstreamnt
atggcggccgcgaacgctccgatcaccatgaaggaggccctaacgcttccgagcgttggg
attaatccacaattcataacgtttacacatgttactatggaatccgataagtacatatgc
gttcgggagacttcgcctcagaacagtattgttattatcgatatgagtatgccgatgcaa
cctctgaggaggcctatcaccgcggactctgcacttatgaatccgaattccaaaattctt
gccttgaaagctggagtccaaggtactactcaggatcatcttcaaatatttaacatcgag
atgaaagcaaaactgaaatcacatcttatgccggagcagattgttttctggaagtggata
accccaaagatgttgggtttagtcactcagactacagtataccactggtcaattgaaggt
gaatctgaacctgtaaaggtgtttgagcgaacagctaatctggctaacaatcagattata
aattaccgctgtgatccttccgagaagtggttggttttgattggaattgctcctggtgca
ccagagaggccacaattggtgaaaggaaatttgcaactcttctctgtggatcagcaacgc
agtcaagctcttgaagcacatgctgcatcttttgcccaatacaaggtcccagggaatgag
aattcttcaactcttatttcttttgccactaagaccctcaatgctggacagattacatca
aagttgcatgttattgagctcggtgcccagccagggaaaccatcttttacgaagaaacaa
gcagatcttttctttcctccagattttaatgatgatttcccagtcgccatgcagatgtct
cacaagtacagcttgatttatgtaattacaaagcttgggctactatttgtgtatgattta
gagacagctagtgccgtttacagaaatagaattagtccggatccaattttcttgacaacg
gaggcttcatctgttggagggttttatgcggttaataggcggggccaggtgttgttggct
acaattaatgagcaaacaattgtgccttttgtcagcggccagctaaacaatttggagctt
gctgtcaatctggctaaaagaggaaatcttccaggtgctgagaatctggttgtccagcgt
tttcaagaactgtttgcccaaacgaagtacaaagaagctgctgagcttgctgcggagtcc
ccacaaggaattctccgcacacctgatactgttgctaaatttcagagtgttcctgtccaa
gctgggcaaacaccacctttgttgcagtactttgggacactcttgacaagagggaagctc
aacgcatttgaatcattggaattgtcacgtcttgtggtgaaccagaataagaagaacctt
ttggagaactggttggccgaggacaaactcgaatgcagtgaggaactgggagatcttgtg
aagactgtggataatgatctggctttgaaaatatatattaaagccagagcaactcccaaa
gttgttgcagcttttgctgagcgaagggagtttgacaaaatactgatctactcaaagcag
gttggctacacacctgactacctgttccttttgcaaacaattcttcgagcagatcctcag
ggtgctgttaattttgcattaatgatgtctcaaatggaaggtggttgtccagttgattac
aacactataacagatctcttccttcagaggaaccttattcgtgaggcaaccgcctttcta
ttggatgttttaaagccaaatcttccagagcatgcattcctgcaaacaaaggtccttgag
atcaatttagtgacttttcctaatgtggccgatgctattttagccaatggaatgttcagt
cattatgaccgtcctcgtattgcccagctatgcgaaaaagctggtctttatgtgcgagct
ttgcaacattactcagagttgcctgatattaaacgtgtcatagtgaatacacatgcaata
gagccacagtcacttgtggagttttttggcactctgtcgaaagaatgggcgttggagtgc
atgaaagatcttttattggtcaacttaagaggaaaccttcagatcattgtgcaggttgct
aaggaatattctgagcagttgggtgttgatcaatgcatgaagctctttgaacagttcaag
tcatatgaagggttgtacttcttccttggttcgtttttgagctcaagtgaggatcctgat
atccacttcaagtacattgaggcagctgctaaaactggacaaatcaaggaggtggagcga
gttacaagagaatcaaacttctatgacgctgagaagacaaagaacttcttaatggaagct
aagctccccgatgcacgtccattaattaatgtttgtgatcgttttggatttgttccagat
ctcacccactacttgtacacgaacaatatgcttcgttacattgaaggttacgttcagaag
gtgaaccctgggaatgctccattagttgtgggacagttgctagatgatgagtgccctgaa
gattttatcaaaggcttgattctttctgttcgttcgttgcttccagtggagccccttgtg
gaggaatgtgagaagaggaatcgccttcgtttactcacacagttcttggagcatcttgtg
agtgagggaagccaagatgtacatgtgcacaatgctttgggtaaaatcatcattgatagt
ggcaataatccagagcacttccttaccacaaacccgtattatgattcacgtgttgttggt
aaatattgtgagaaacgtgatcctaccctagctgttgttgcttaccgccgtggacaatgt
gacgatgaacttattaatgtcacaaataagaactcattgttcaaattgcaagcaaggtat
gtggttgagaggatggatgaagatctttgggggaaagttcttgaccctgagaatgagtac
agaagacagcttattgatcaagttgtttctactgccttgcccgagagcaagagcccagaa
caagtttctgcggctgttaaggctttcatgactgctgatttgcctcacgaattaattgag
cttcttgaaaagattgtgcttcaaaactctgccttcagtggaaactttaatctgcaaaac
ctgctaattttgacagccatcaaggcagatccgtctagagttatggattatattaatagg
ctagataattttgatggacctgcagttggggaagtagctgtggaagcccaattgtatgag
gaagcgtttgcaatcttcaagaagtttaacttgaatgtccaagctgttaatgtcttgttg
gataacatccgaagcatcgatagggctgtggagtttgccttccgtgtggaggaagatgct
gtttggagccaggttgcaaaggctcaacttcgggagggtctagtgagcgatgctattgaa
tcatttatccgtgcggatgatgccacccaattcttggatgttattcgtgcttctgaggat
gctgatgtgtaccatgacttggtgaagtaccttctaatggttaggcaaaaggtcagagag
cccaaggtggacagtgagctcatttatgcatatgcaaagattgataggcttgctgacatc
gaagaatttattcttatgccaaatgtcgctaatctccaaaatgttggtgatcgcctatat
gacgaggctctctatgaagctgcaaagataatatatgccttcatatctaactgggccaag
ttggctgtcacacttgtgaagctcaaacaatttcaaggtgctgttgatgcagcacgaaaa
gctaacagttcaaagacatggaaggaggtttgctttgcttgtgttgatgctgaggagttc
cgcttagctcagatttgtggtctcaacattattatacaggtggatgacttggaagaggtc
agtgaatactaccagaatagaggatgcttcaatgagcttatatctctaatggagagtggt
cttgggttagaacgtgctcacatgggaatctttaccgagttgggggttctgtatgctaga
tatcgtccagagaaacttatggagcacatcaaattgttcgcaaatcgtctaaatatcccc
aagcttataagagcatgtgatgagcagcaacattggaaggagctgacctatctgtatatt
caatatgatgagtttgataatgctgcaactaccatcatgaatcactcccccgaagcctgg
gatcacatgcagttcaaagatgtggcagttaaagttgccaacgtggagctatattacaag
gctgtgcacttctacttgaaagagcacccggatctcattaacgatcttctaaatgtgctc
gcgcttcgtgtagatcacacacgtgttgttgacatcatgcggaaggctggtcacctgctt
ctcgtgaagccatacatggttgcagttcagagcaacaatgtctctgctgtgaacgaggct
ttgaatgagatttatgttgaggaggaagactatgaaagattgcgcgaatcaattgatttg
cacgatagctttgaccaaataggcctcgctcaaaagattgagaaacatgagcttctggaa
atgagacgggttgctgcttatatttacaagaaagctggaaggtggaagcagtccattgga
ttgtcaaagaaagacaaactttacaaagatgccatggagacagcctcacaatctggtgac
cgtgaactggccgaggagttgcttgtttacttcattgaacagggaaagaaagaatgcttt
gcatcgtgcctctttgtctgttacgatttgataaggccggacattgtccttgaacttgca
tggatgaacaacatgatcgactttgctttcccatatctgttacagtttatccgtgaatac
actggcaaagttgatgaactggttaaagacaaaattgaagcgcaaaaggagatcaaggct
aaagaacaagaagataaagaagtaattgcacagcagaacatgtatgctcagttgctgcct
cttgctttgcctgcaccaccaattcctggtatgagcgggggtatgggaggagggtatgct
ccaccgccacctatgggaggaatgccaccaatgggcatgccgccttatggcatgccacca
atgggcagcagctactga |