Pyrus communis (pear): 137734885
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Entry
137734885 CDS
T10779
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137734885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137734885
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137734885
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137734885
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137734885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
137734885
NCBI-ProteinID:
XP_068330300
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Position
5:3720675..3725696
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AA seq
553 aa
AA seq
DB search
MLPHYNSFPRHSNRAHTTGSLAPPPHQMQPQLGIRNPQIPVQFSNSNSMIAQPNFMNLPN
NPLPMQNNHLGVPQFGSIGPTSQPGQQNVGFFGSQGMPQFCNLVQQVNQLMSSQVPGKIF
GHNMLNLQQQMNQNMGLPYGQFCLPNSMQNMNQFVPMQMQNPSQVHPNYGVPGSNQAPQT
TMSQNVPLFANNQVNLHSNQAGQQVNQNQQNLGLPPVQGTQGNKTNSSGGYNSNSNWKQS
PSKSFTKNLKNHQGGFQNPQSHHMKNAKGKFAFPNGHKGKGLRNESEGKFALANSSNQGR
ERKRPLFLSYTEQEIERWREERRKHYPSKSNIEKKISGKQINSEVIEREANIRREQLKDI
LTKQAELGVQVAEVPSHYLADSNQGHIKEDNETLTKKGRSTNKFGKREKYDRKDRFSKRQ
RSHQKDSSNDPSFDKREPTLLQKLLSADIRRDRSHLLQVFRFMVTNSFFKDCPDKPLKFP
TVAVKESAGDGEVAQKPSSLIEKDAFKGSDKSMVGRVYNNHSGNNNNVENSVDSSDEDDG
EGEGTERPKRKKS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgttacctcactacaattcctttcctcgccattccaaccgagctcacacaactggtagc
ttggctccacctcctcaccagatgcaacctcaattgggtatcaggaatccccaaattcca
gtccaatttagtaattctaattctatgatagctcaacccaatttcatgaatctaccaaac
aaccctcttcctatgcaaaataaccatctgggtgtgcctcaattcggttccattggccct
acatctcaaccgggtcagcagaatgttgggtttttcggttcgcaaggtatgcctcaattc
tgcaatttggtgcagcaagtgaatcaattgatgtcatctcaagtgcctgggaaaatattt
gggcataacatgttaaatttacagcaacagatgaaccagaatatgggtttgccgtatgga
cagttttgtttgccgaattcaatgcaaaacatgaatcaatttgtgccaatgcaaatgcaa
aatccatcgcaagtccatcctaattatggtgttccgggatcaaatcaagcacctcagacc
acaatgtctcaaaatgtcccattgtttgcaaataaccaggttaatctgcattctaatcag
gcaggccagcaagttaaccaaaatcagcaaaacttgggtctacctccagtgcaagggaca
cagggaaataaaaccaatagtagtggtggttacaattcaaattccaattggaaacaatca
ccaagcaaaagctttacaaagaatctgaagaatcaccaagggggatttcagaatcctcag
tcgcatcatatgaaaaatgcaaagggaaagtttgcatttcctaatgggcacaaaggaaaa
gggttgagaaatgaaagcgaaggaaagtttgctctggccaactcttccaaccagggcagg
gaaaggaagagacctcttttcttgtcatatacggaacaagagattgagcggtggcgggaa
gaacgtaggaagcactacccgtcgaaatccaacatagagaagaagataagtggaaagcag
ataaattcagaggtcatcgaaagagaggcaaacattcgacgagagcaactcaaggatatt
cttacaaagcaggctgagttgggagttcaagttgctgaagtaccatcacactaccttgca
gattcaaatcaagggcatataaaggaagataatgaaacattgaccaagaaggggaggtca
acaaacaagtttggtaagagagaaaaatatgatagaaaggatcggttttccaagaggcaa
agatcacatcaaaaggattcgtctaatgacccttctttcgacaaaagggagccaaccttg
ctgcagaagcttcttagtgcagatattaggagagacagaagccacctgctgcaggtgttt
aggttcatggtgacaaactctttcttcaaagattgtcctgacaaacctttgaaattccct
actgtagcagtaaaagaaagtgccggtgacggagaggtggctcaaaagccgtcctcactt
atagagaaagatgcttttaagggaagtgataaatccatggttggaagagtttataacaat
cattctggaaataacaacaatgtcgagaattctgttgatagcagtgatgaagatgacggt
gaaggagagggaacagagagacctaagaggaagaaatcatag
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