KEGG   Pyrus communis (pear): 137734910
Entry
137734910         CDS       T10779                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137734910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcox03021]
    137734910
Enzymes [BR:pcox01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     137734910
Transcription machinery [BR:pcox03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     137734910
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 137734910
NCBI-ProteinID: XP_068330334
LinkDB
Position
1:2379051..2385685
AA seq 1203 aa
MGASSNAKGDIGMSSKGESFTNGVDMDIDDSDYDDEHDYSTSLNDLGEGLLMNFCKEAAT
SFFVEYGLISHQINSYNDFIKNGIQRVFSSFGEIVVEPGYDPSKKGDNEWRYALVKFGTV
TLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCSKMKVNITVEVYNQRLVSSDKFKTGKER
FLDKEILSTDTRDITIGSVPVMVKSDLCWMKDVEKGDCDFDHGGYFIIKGAEKTFIAQEQ
SCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWV
WFFALGVSSDREVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDD
VIKKTAFPPGESIEDCINLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRN
KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFS
TGAWCHPFKRMERMSGVVANVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKV
CFLSTPDGENCGLVKNLATTGLVSTNILESLLPELSLCGMEKLVDDTSTSLQGKLKVFLN
GDWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENL
NKIKAFKGGKYPFQYFLDKGIIELIGAEEEEDCSTAWGIRYLFMEEKGKSAVKYTHCELD
MSFLLGLSCSIIPFANHDHARRVLYQAQKHSAQAIGFSTTNPNLRVDTLSHQLHYPQRPL
FQTMTSDCLGKRGHQLGQNRVLPKPELHNGQNAIVAVNVHLGFNQEDSIVMNRASLERGM
FRSEHIRSYKAEVDNKDSLEKRRKPDDCVNFGKMQSKFGRVDNLDEDGFPYVGANLQSGD
IIIGRCSESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSMRQVRSPCLGDKFSSMH
GQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGQKRYA
TPFSTLSVDDIAKQLHRAGFSRCGKERVYSGGTGQMVRSLIFMGPTFYQRLIHMSEDKVK
FRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQVYICQ
KCEHVANVIQRSVEGGRKIRGPYCRNCNSADDLVKANVPYGAKLLCQELFSMGISLKFET
RFS
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgggggcgtcctcgaatgccaagggagatatcggtatgagcagcaagggagaaagtttt
acaaatggtgttgacatggacatcgacgatagtgactatgatgatgaacacgattactcg
actagccttaacgacctgggggaaggacttctgatgaatttctgtaaggaggcagcaacg
tcattcttcgtcgagtatggcctcattagtcatcaaatcaactcatacaatgactttata
aaaaatggcatacaaagggtcttcagttcttttggtgagattgtggttgagcctggctat
gacccgtcgaagaagggagataacgaatggcgctatgctttagtgaagtttgggactgtt
acccttggcaggccaagtttttggggtggttctgacaatgataaggagtataatatgttg
cctaggcatgctcgacttcagaacatgacatactgctctaagatgaaagtgaatatcacc
gtcgaggtatataatcaacgacttgtcagcagcgataagtttaagactggaaaagaacgg
tttcttgacaaggaaattttaagtacagataccagagacattacaattggtagtgtccct
gtgatggtgaagtctgacttatgctggatgaaggacgttgagaaaggtgactgtgatttt
gatcacggaggctattttataatcaagggtgcagagaagacatttattgcacaagaacag
agctgtctgaagaaacttctcatcacaaataatcagggtctgacagtagcatataggtca
gaggtgaagaggcataggttaataattagactagttggaatttctaaacttgaaaacatt
gaaggagtagagaaagtccttaccgtttacttcatgtcgacagaaatccctgtgtgggta
tggttttttgcgcttggcgtttcatcggatagagaagttattgatctgattgattatggt
agtgaagatgccagcattttgaacatactttttgcctcaattcgcgatgccgataaagct
actgaaaaagtggatgggggcttccgtagggggaagaatgccctcaaatatgtggatgat
gtgataaagaaaactgcatttccacctggggaaagcatcgaagactgcattaacttgtat
ctttttcccaatctcagaggcctaaagcaaaaggctcgctttcttgggtatatggtgaag
tctctgttacaagcctccgctggtcgcaggaaatgcgacaatagggatgactttaggaac
aagaggttggacttggcaggtgagcttctcgaacgagagctaaaggcgcatatcggacat
gcgaggcggcgcatggcaaaggccttgcagagagacctttacggtgatcgggttgtgcgg
ccaattgaacactacctagatgcctccatagttactaatggcatctcgagagcattctca
actggagcatggtgtcatcccttcaagagaatggagaggatgtctggtgtagtggctaat
gttgggcgagcaaatccgctgcagacaatgattgatatgcggaagacaaggcagcaggtt
caatatacagggaaggttggagatgcaagatacccgcatccttctcactggggtaaagtt
tgctttctctcaaccccagatggtgagaattgtgggcttgtaaaaaatttggctaccact
ggattagtaagtacgaatatattggaatctctactacctgaattgtctctctgtggaatg
gagaaattggtggatgatacttctacctcactgcaagggaagctcaaagtttttctgaat
ggggactgggttggagtttgtgaagattccctctcatttgtctcggaactcaggaggatg
cgacgtaggaaaaagttgccacctcaggtggaaatcaaaagagatgaaaagcaaggagaa
gtacgagtatattctgatgctggaaggatcctacgccctctcttggtagttgagaatttg
aacaagataaaagcatttaaagggggaaagtatccattccagtattttcttgacaaagga
ataatcgagcttattggagctgaagaagaggaagactgtagtactgcatggggcattaga
tatctgttcatggaagaaaagggaaaatcagctgtaaagtacacacactgtgagctggac
atgtcattcctgttgggtttaagctgtagcattatcccatttgcgaatcatgaccatgca
aggagggtcctctaccaggcccagaagcactcggcgcaggctattgggttttctaccaca
aatcctaaccttcgagtggatacgctgtctcaccaactgcactacccccagaggccactt
tttcagacaatgacgtccgactgccttggcaaacgaggacaccaactgggtcaaaacaga
gttttgccaaagcccgaattgcacaatggtcagaatgcgattgtggcagtcaatgttcac
ttgggattcaaccaagaagacagcatagtaatgaaccgggcatcattggaacgtggtatg
ttccgatctgagcatatcagaagttacaaggctgaggttgacaacaaggactccctggaa
aaaaggcggaagcctgatgattgtgtcaattttggcaagatgcagagcaagtttggccgg
gttgacaatctcgatgaggacggctttccatacgtcggtgcaaacttgcagagtggtgat
atcatcatcgggaggtgcagtgaatcaggagctgatcatagcatcaaactgaagcacacc
gaaaggggaatggttcagaaggttgtgctttcttctaatgatgatggaaaaaactttgct
gttgtttctatgagacaggttcgctcaccgtgtcttggagacaagttctcgagcatgcat
gggcaaaagggggttctaggttttctggagtcccaagagaacttccctttcacagtacaa
gggatagttccagatattgttataaatccccatgcatttccgtcaagacaaactcctggt
caactcttagaagctgctttagggaagggaatcgcctctggtggtcagaagagatatgcc
accccattctctactctctctgtcgatgacatcgcaaaacaactgcatagggctggattt
tcaagatgcggaaaagagagagtatacagtggtggaaccggtcaaatggttcgttccctc
atattcatgggccccaccttttatcagcgcctgattcacatgtctgaagacaaagtaaag
ttccggaacactgggccagtccaccctctcacccgtcagccggtggcagatcggaagcga
tttggagggatcaagtttggagaaatggaacgtgactgcctaatagcacacggagcttcg
gcaaacttacatgagcgcctattcactctcagtgactcctcccaggtgtatatctgccag
aaatgcgaacacgtagctaatgtgatccaacggtcggttgaaggaggacgtaagatcagg
ggtccgtactgccggaattgcaattctgcagatgatcttgtgaaggcaaacgtcccgtat
ggggcgaagttactgtgccaggagctgttcagcatggggatcagtttgaagttcgagact
cggttttcttag

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