Pyrus communis (pear): 137735249
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Entry
137735249 CDS
T10779
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
pcox Pyrus communis (pear)
Pathway
pcox04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
137735249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcox03000
]
137735249
Transcription factors [BR:
pcox03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
137735249
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
137735249
NCBI-ProteinID:
XP_068330761
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Position
5:28254918..28257721
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AA seq
402 aa
AA seq
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MAMEDHDRSSDFLEEHEQYYYSDNNCNLGIPGDDLFSILQSLDDHGFGGGGGGGGGGVVD
FPSPLATAPFDDDQLLSVFSSSPKDLSSSADQTEFDETNSPPKTKRLKLSSAATPTATAT
TTTTNSSDQDGGRMSHITVERNRRKQMNDHLTVLRSLMPCFYVKRGDQASIIGGVVDYIN
ELQQVLQSLEAKKQRKAYSCELLSSPRLQQVSSPRPPGPSPPVLSPRKPPLSPRLGGSSL
PPISPRTPQPTSPYKPTAAWTILQQPQILPAAANIISNYLISNPTMAASSSLEPSPTSSS
ATSSINNSVDNLNELFANSKSAIADVEVKFSGPNVLLKTVSPRIPGQALKIISALEDLSL
EILHVSVTTVDETMLNSFTIKIGIECQLSAEELAHQIQQTFC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaagatcacgaccgttcatctgattttctcgaagaacatgagcagtactac
tacagcgataacaattgtaacttgggaattccgggggatgatctttttagcatattacag
agcttagatgatcatgggtttggaggaggaggaggaggaggtggcggcggagtcgtagac
tttccttccccgttagctacagcgccattcgatgatgaccaactactttctgtttttagc
tcatcaccaaaagacctctcctcctcagctgatcaaaccgagtttgatgaaactaactct
ccacccaaaaccaagagactcaagctctcatcagctgccacccccaccgccactgccacc
acaacaaccacaaattcttcagatcaggatggagggcggatgtctcatataacggtggag
cgcaaccgcagaaagcaaatgaacgaccacttgactgtcttgcgctctcttatgccttgt
ttctatgttaaacgaggagatcaagcatcaatcattggaggggtggttgattacatcaat
gagctgcagcaagttcttcaatcactcgaagccaaaaagcaacgaaaagcatacagctgt
gaactgttaagcagccctaggttgcagcaggtttcaagtccaaggccacctggtccctca
ccaccagttctcagccctagaaagccacctctcagccctaggctcggcggcagcagctta
ccacccatcagcccaagaactccacaacccaccagcccttataagcccacggcagcctgg
acaatattgcaacaaccacaaatattacctgcagctgctaatattattagtaattatctt
atttctaatccaacaatggctgctagctcatcacttgagccatcccctacttcttcaagt
gctacttcctctattaataatagtgtcgacaatctcaacgaacttttcgccaactccaag
tccgccattgcggacgtggaggtgaaattttcgggtccaaatgttcttttgaaaacagtg
tctcctcggatacccggacaggctctcaaaatcatttccgcccttgaagacctttcgctt
gaaattctccatgtcagtgtcaccaccgttgacgaaaccatgcttaattccttcaccatc
aagattggaattgaatgccaacttagtgccgaggaactcgctcaccaaatccagcaaaca
ttctgctaa
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