Pyrus communis (pear): 137735872
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Entry
137735872 CDS
T10779
Name
(RefSeq) SAC3 family protein B-like isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137735872
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
137735872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
MCM3AP_GANP
INT10
Motif
Other DBs
NCBI-GeneID:
137735872
NCBI-ProteinID:
XP_068331324
LinkDB
All DBs
Position
6:complement(18759130..18769314)
Genome browser
AA seq
1576 aa
AA seq
DB search
MYPGFGKASGPTGPPGSQPLFGNLGGGRPPSPSPPTTPPFSGAAPLRSPSRGPEAPGQLY
SLPLGFERVRPAASQPFPSAGVYRRPESSGQLHSPPLAFERARPAASPSHPSAGVHRSTE
SHPTWDHGQRSSFKNYDTQAHQRPSAVTSFVVSRNSGTSVTAKVSRFQDTEGIRSPPFLS
KDVNFRNSTQGAPRSHLVAPRIRSPPLVSYEDLHPSVGVEEPSVSSVGFNTRSNTNFSTP
DSRVHQKSLQSASNTISEAAAGNATNIPVAKRTRSPPLLPEDQVFHGNSHATQEGTEREM
QAKTKRLARFKVELSKTPQNNPDNVEPGVSANRHEQSNVERNKLAQYKSTELAMGGSDGN
ALPEDEGVESSGIIIGLCPDMCPESERAERERKGDLDQYERLDGDRNQTSMSLAVKKYNR
TAERDANLIRPMPILQKTIDYLLNLLDQPYNDRFLRIYNFLWDRMRAIRMDLRMQHIFNQ
EAITMLEQMIRLHIIVMHELCEYSRGEGFAEGFDAHLNIEQMNKTSVELFQLYDDHRKKG
INIPTEKEFRGYYALLKLDKHPGYMVEPAELSLDLAKMTPEIRQTSEVLFARDVARACRT
GNFIAFFRLARKASYLQSCLMHAHFSKLRTQALASIHAGLQNNQGLPIADGAKWLAMEED
EIESLSEYHGFVIKSFQEPYIVKEGPFLNGDEDYPTKCSKLVDMKKSRRIVEDVLASSQV
IPSSSKATKKTQLTKSNKPEPKTISYVEKKSPVRRAPAIEVTKPLHEVDEEMPNFEAFSP
PKDARQKQQMIQAPIFSSPEDSRQKQQTIQTPIFGIYSEDSPKVAAVSPSPWGFSSFTRQ
PDKVGTIEKRNYDVLFSNSPERSMHSGMERMPLQIESKTSVQERSVGIYSSGKEYPDIQI
MVTDNLEAEEPSDLHQIDENNDVMESSQQEEIAEAKLKLILRLWKRRALKLRQLREKKQL
AANAALNSLSLGPPIQLKTDQPSISGEFDIDLVLRERFKNHGRSWSRLNVSDVIADILGT
RNPDARCLCWKTVVCSQMNNLEGDDLGQRSHFLGAAPWLLSKLMPSANDADNDDEDLVVS
SPGVSIWKKWVRGQAGSDLNCYLSVVKDASFDNLSQSVSGASAVLFLTSESISWNLQKVR
LHNLLMLIPYGSCLPLLILSGSYKNNVDDSTIVDNLGLRDLDKSRISSFLVVPLVESQQM
GQLDGFFSDNQLREGLRWLASESPLQPILHHVKTLELVLTHLNSSLEPLDRMKDYEAGPD
NCILAFNEALDWSQKEIAAAVKSNPSSWPCPEIALLEEFSDEYRVVKWCLPSVGWSSAEK
VEPLMSALGDCRLPAFPDHISWLPQCCNAGKEIENLRGELENGLIEYLTNSSKMMGRALA
IKEAHVMLQRSCRLQRHDSCCYIVPNWVMIFRRIFNWRLMGLANGASSSAYVLESPHLNA
VFENLGKLGLEDAGPSPCYLNQPSLDEIIEVGRAPLSSHRGQPLVEPGVAVPETSPNGEI
HETPNTTDWMEDERSLAHDDQAEIENVSHENGRLENAGGEMVVTGEVGKGAEKLSILLEQ
CDMLQNVIDEKLSIFF
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgggatttggcaaggcgtcaggaccaacaggaccgccgggatcgcagccactt
ttcggaaaccttggcggcggtcggccgccttcgccttctccgccgaccacccctcctttt
tccggcgctgctccgctgcgttctccgtccagggggcctgaagctccagggcagctgtat
tctcttcctttaggctttgaaagagttcgtcctgctgcgagtcaacctttcccatctgcg
ggagtctataggcggcctgaatcttcagggcagctgcattcacctcctttggcttttgaa
agagctcgtcctgctgcaagcccttctcacccatctgcaggagttcataggtccacagag
tctcatcctacttgggatcatgggcagagatcctcctttaagaattatgatacccaagct
catcaaaggccatctgctgtcacatcatttgttgtttctcgtaattctggaactagtgtt
actgccaaggtgtccagattccaagacactgaagggatcaggtcgcctccctttctgtct
aaagatgtcaattttagaaattccactcaaggtgcccccagaagtcacttagttgctccg
agaatacgatcacctcccttggtctcttatgaggatttgcatccttccgttggagttgaa
gagccttctgtatcttctgttgggttcaatactagatcaaataccaattttagtactcct
gattctcgggtacatcaaaagtctttgcaatctgcaagcaatactatttctgaagctgct
gcaggaaatgcgaccaacatccctgtggccaaaaggacgaggtcacctcctttacttccg
gaggatcaagtgtttcatggaaactctcatgccactcaagagggtactgaacgagaaatg
caagccaaaactaagcggttagcccggttcaaggttgaattaagtaaaactccacaaaac
aatcctgataatgtagaaccaggggtttctgcaaatagacatgagcaatctaatgttgag
aggaacaaattagctcaatataaatctaccgaactggctatgggtggtagtgatggcaat
gcattacctgaggatgaaggcgtggagtcatctggtatcattattgggttgtgcccggat
atgtgtccagagtcagaaagggcagaacgagaaaggaaaggggatcttgatcaatatgag
cgcttggatggggatagaaatcaaaccagcatgtcccttgctgttaaaaagtataacaga
actgctgagcgagatgcaaacctgataagaccaatgccaatcctgcagaagacaattgat
tatttgctcaatttgcttgatcagccttacaatgataggtttcttagaatttacaacttc
ctgtgggatcggatgcgagcaattcgaatggacttgagaatgcagcacatttttaaccaa
gaggctattactatgctggagcaaatgataagacttcacataattgtcatgcatgaatta
tgtgaatactcaagaggagaaggctttgctgagggatttgatgcacacctcaatatcgaa
cagatgaataaaacatctgttgaattgttccaattgtatgatgatcacagaaagaaagga
ataaacattcctacagaaaaagagtttcgaggttattatgcccttctcaagctggacaag
catcctgggtacatggttgaacctgcagagctctcgcttgatcttgcaaagatgactcca
gaaataagacaaacttcagaggtgctatttgcacgtgatgttgctagagcttgcagaact
ggtaattttattgctttttttcgacttgcaaggaaagcaagttacctccaatcatgccta
atgcatgctcacttctcaaagttacgaacccaggcacttgcttctatacacgcaggtctc
cagaataaccaaggtctccctattgcggatggtgccaagtggctggcaatggaggaagat
gaaattgaaagcctttcagagtatcatgggtttgtaataaagtcattccaggagccatat
attgtgaaggaaggtccatttctcaatggtgatgaggattatcctaccaagtgttctaaa
cttgtcgatatgaaaaagtcaagaaggatagtagaggatgttttggcttctagtcaagtc
ataccctcgtcttctaaagcaacaaaaaagactcagttgactaagtcaaataagcctgaa
ccaaaaactatttcatatgttgaaaagaaaagtcctgtgcgtcgtgctccagccattgaa
gttacaaaacctctccatgaagttgatgaagaaatgcctaattttgaagctttttcaccc
ccaaaagatgccagacaaaagcagcaaatgattcaagcaccaatcttttcatctccggaa
gattccagacaaaagcagcaaacgattcaaacaccaatttttggtatatacagtgaagat
tcccctaaggtggctgctgtgtctccttccccgtggggtttctcatcatttacacgtcag
ccggataaagttggtaccattgagaagcgaaattatgatgttctttttagtaactctcca
gagagaagcatgcattctggcatggaacgaatgccactgcaaattgagtcaaaaacatct
gtacaagagagatctgtcggtatatatagttctggtaaggaatatccagatatccaaatt
atggtcactgataacttggaagccgaggaaccttcagatcttcatcagatagatgaaaac
aatgatgttatggagagttctcaacaggaagaaattgcagaggcaaaacttaagttgata
ctgagattatggaagcggcgtgctctgaagctaagacaattgcgagagaaaaagcagttg
gcagcaaatgctgcattgaattctttatcattggggccgccaattcaactcaagacagat
caaccaagcatttctggcgagtttgacattgatctcgtcttgagggagagatttaaaaac
catggtcggtcatggtcaagacttaatgtttcagatgtaatagcggatatactgggcaca
agaaacccggatgctagatgcctctgttggaaaactgttgtatgttctcagatgaacaat
ctagaaggtgatgacctggggcagaggagccacttcttgggagcagccccctggttgctt
tcaaaactcatgccttcggcaaatgatgcggacaatgatgatgaggatctcgtagtttcg
tctcctggtgtctctatatggaagaaatgggtgcgtggccaagctggttcagatctgaac
tgctatttgtctgtggtcaaggatgcaagttttgataacctaagtcagagtgtgtctggt
gcaagtgctgttctgttccttacatctgaaagtatctcttggaatttgcaaaaagtccgt
cttcataaccttctaatgttgataccttacggctcctgcttgccccttctgatcttaagt
ggctcgtacaagaacaatgttgatgactccactattgttgataatttgggtctccgtgac
ttggataagtcacgaataagcagctttctggttgttccgcttgttgaaagccagcaaatg
ggacaattggatggttttttcagtgacaaccaacttagggaggggcttcgatggcttgca
agtgaatcgccccttcaacctattcttcatcatgtaaaaacactcgaactcgttcttacc
cacttgaattcttcattggagccactagacagaatgaaagattatgaagcaggtccagac
aactgtatccttgccttcaacgaagcattggattggtcacagaaggaaattgctgctgct
gtcaaatcaaatccatccagttggccttgccccgagattgctttgctggaggagttcagt
gatgagtacagggttgtgaaatggtgcttgccaagcgtaggatggagctcagcggaaaaa
gttgaaccactaatgtcagctctaggggattgtaggcttccagcttttcctgaccatatt
tcgtggctaccccaatgttgtaatgcaggaaaggagattgagaacctgagaggtgaactt
gaaaatggcttgatcgaatacctgacgaattcaagtaagatgatgggacgtgcacttgct
ataaaagaggcacatgtaatgctacaaagaagttgtcgactgcagcgccatgactcatgc
tgctatatagtcccgaattgggttatgatcttcagacgaattttcaactggcggttaatg
ggtttagccaatggggcctcttcgtcagcttatgtcttggagagtcctcatcttaacgca
gtttttgaaaatctgggtaagttggggcttgaagatgccggaccttcaccctgttacctt
aatcagccgtctctggatgaaatcatcgaagttgggcgcgcccctctttcatcccataga
ggtcagcccttggtagaacctggtgtagccgttcctgaaacatctcctaatggtgaaatc
cacgagaccccgaatacgactgactggatggaggatgaacgaagtttagcgcacgatgat
caagcggaaatagaaaacgtatcccacgaaaatgggagattggagaatgctggcggagaa
atggtggtgactggagaagtgggcaagggggctgaaaaattaagcatattgttagaacag
tgtgacatgttacagaatgtgatagacgagaagctgtccatttttttctaa
DBGET
integrated database retrieval system
