Pyrus communis (pear): 137736891
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Entry
137736891 CDS
T10779
Name
(RefSeq) uncharacterized protein
KO
K11797
PH-interacting protein
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137736891
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
137736891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WDR55
Bromodomain
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_HPS5
WD_LRWD1
VPS8_N
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
137736891
NCBI-ProteinID:
XP_068332304
LinkDB
All DBs
Position
6:complement(20606407..20618163)
Genome browser
AA seq
1726 aa
AA seq
DB search
MVLQKFPSRDAPSVGMKPLSFLSKVHDKNQPEDLETTYITHAKEPDADIDLREVYFLIMH
FLSAGPCHRTCGQLWNELLEHQLLPRRYHAWYSRKGVHSEDENDDGKSFPLNYNMLVHRY
PHIENDHLVKLLKQLISSAAPPSRGTSGGNAPNAADVPTLLGRGSFSLLTYERDQVHNEM
KPPPAHMRWPHMKAHQVQGLRLREIGGGFTRHHRAPSIRAASYAIAKPSTMFEKMQFTKR
IRGHRNSVYCATFDCSGRYVITGSDDRLVKIWLMETAFCLASCRGHEGDITDLAVSSNNA
LVASSSNDHMIRVWRLPDGLPISVLRGHTAAVTAITFNPRPGSMYHLLSSSDDGTCRIWD
ARSSQVSPRIYIPRPSDAVVGRNSGPSSSTVTQDHHIFCCAFNANGTVFVTGSSDTLARV
WTASKPGSDESDQPNHEIDVLSGHENDVNYVQFSGCAGVSRFMAADTSKEENTPKFKNSW
FNYDNIVTCSRDGSAIIWIPRSRRSHGKAGRWTRAYHLKVPPPPMPSQPPRGGPRQRILP
TPRGVNMITWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIA
MSAGYDGKTIVWDIWEGIPIRTFETSHYKLVDGKFSPDGTSIILSDDVGQLYILDSGQGE
SQDDAQYDQFFLGDYRPLIHDSFGNVLDQETQLPAYRRNMQDLLCDSGMIPYEEPYQSAY
QKRRLGALGAEWRPSSLRLAVGPDFSLDPDYQMLPLADLDILTEPLPEFLDAMDWEPENE
IRSDDTDSEYHITEDYSTGGEQGSLSSNPSIDPECSEESEDEDAEMDGLRRSKRKKQKAD
NEVVTSSGRCVKRRNLDECAANSSRSNRARKSRHGRKASRKKCSSSLRPQRAAARNALSL
FSKITGRSADGEDEDGSEDDMSGSESPFQDSNIESDESDKQNEQGKHSKGKEVLIDESED
MVKPFEEFPVNTGSRRRLVLKLPRRESNKLVSRESTVNNRSNEGDLVDQSYRVPQEANEN
NTSPQDPMSSPGDEKCSKFETAVSGQSQRVKNHLNFKGRISWGGSRARTTKRQRSGEFMS
LDALARASAVVGHNEKDYTKPENDSPHSESQRFRDKMDTVAIGNEKTTRASTSDGLSGEV
NVKEHSDFSECKDHDQLPKSVHMAPWDASTSFCLDKDGTGFSFEQNEKLLPVSTKLRSRR
ISKDPSPCKQEINSVVENMENGRTMEQGPVVPEDDGTHKFIPDHRYDGSRESDNQSDKNV
IASTHESVESSLQKNKMFSAVYRRVKPHRGRSNLEGDSGVNGEGCSYTSNTSNHNIIAGD
IQDDTTDGGCKTRSMGLKASACDPSSPDHDPKLAEGHEPGYTLNWISSMDKFQLGNEERG
SSSRTKVGLRSTRNRRSSYLDMSPMDKRKPHQSGKKVSWLMLSAHEESSRYIPQLGDKVV
YLRQGHQEYFDLGGLRENPPWRFIKGRIRAVEFCNVQDLEYSSRAGSGDSCCKLTIQFVD
PSSDVYGKSFKMTLPEVTGFPDFIVERTRFDSSMERNWSCRDHCKVWWKNEGEDDGKWWH
GRVKSKQFKSSEFPDSPWETYTVQYKSDPSDAQLHSPWELFDENTQWEPPRIDDKSKRKL
HSAFAKLERSAGSRQDPFGVDKLVQLQQKPKFTNWCVVPISLDVIQSRLENDYYRSLEAL
KHDFKVMLANAETYLESNAVKRASDKELLGKLKCLSDWFTQTISSL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggttcttcaaaaatttccttctcgtgatgcaccttctgttggtatgaaacctttgagc
tttctcagtaaggtgcatgacaagaatcaacctgaggatctagagacaacttatataact
catgctaaggagcctgatgcggatattgacctcagagaagtatattttcttatcatgcat
tttctgtcagctggcccatgccatagaacttgtggacagttgtggaacgaacttcttgaa
catcaacttttacctagaagatatcatgcttggtattcaaggaagggcgtgcacagcgag
gatgaaaatgatgatgggaagtcatttcctttaaattacaatatgctggtgcacaggtat
cctcacattgaaaatgaccatttggtaaagcttttgaagcaattgatttcaagtgcagcc
ccaccatcaagaggtacgagtggtggaaatgctccaaatgcagctgatgtacctactctc
ttgggacgtggttcattttcgcttctgacctatgaaagggatcaagtacacaacgaaatg
aagccccctcctgctcacatgcgttggcctcacatgaaagctcatcaggttcaagggcta
aggttgagagaaattgggggaggtttcacccgacatcaccgtgcaccgtctattcgtgct
gcatcttatgccattgcaaagccctcaaccatgtttgagaagatgcaatttaccaagagg
ataaggggccatcgaaactctgtctactgtgcaacatttgattgctcgggcaggtatgtt
attactggttcagacgatcgcctagtgaagatctggttaatggaaactgcattttgctta
gccagctgccgtggacatgaaggagatatcacggatctggctgtgagttccaataatgct
ttggtggcatcctcctcaaatgaccatatgattcgagtatggcgcttgccagacggactg
ccaatttcagtattgcgaggacatactgcagctgttactgccattacatttaatcccagg
ccaggctctatgtaccaccttctatcttcatctgatgatggaacttgtaggatatgggat
gccaggagttctcaagtgagtccaaggatatacattccaagaccttcagatgctgtagtt
gggagaaacagtggtccatcttcaagcactgtcacacaggaccatcatatcttctgttgt
gcattcaatgctaatggaacagtctttgtcaccggtagctcggacactcttgcaagggtg
tggactgcttctaagccaggctcggatgagtcggaccaaccaaatcatgagattgatgtg
ttatctggccatgagaatgatgtcaattatgtacaatttagtggttgcgctggagtatct
agatttatggcagctgacacctcaaaggaagagaacactcccaaatttaaaaattcatgg
ttcaattatgacaatatagtcacttgttctcgtgatgggagtgcgattatctggattccc
agatcacgaagatcacatggaaaagctggtcgttggacacgggcatatcatttgaaagtc
ccacctccaccaatgccttctcagcctccacgaggaggccctcgccagaggattcttcca
actcctcgtggtgttaatatgattacctggagtcttgacaatcgatttgtccttgctgct
atcatggattgcagaatatgtgtgtggaatgcttctgatggtagcttggtgcattcactg
acaggtcatactgaatctacatatgtgctggatgttcatcctttcaaccccaggatagca
atgagtgctggctatgatggaaaaacaattgtctgggatatatgggaaggcatacctatc
cggacgtttgaaacttcccactacaaattggtagatggaaagttctcaccggatgggaca
tcaattattctctctgatgatgttggccaattgtatatattggacagtggccaaggggag
tcccaagatgatgcacaatatgatcagttttttcttggtgattatcgcccactcattcac
gatagttttggaaatgttcttgaccaggaaactcagcttccagcataccggcggaatatg
caagatctactttgtgactcaggcatgataccgtatgaagaaccctaccagagtgcatac
cagaagcggcggttaggagctctgggtgccgagtggcgtccgtcctctctaagacttgct
gttgggcctgacttcagtctagatccggattaccaaatgttgcctttggcagacttggat
atcttgactgagcctctaccagagtttttagatgcaatggattgggaaccagaaaatgaa
atacgtagtgatgatacagattcagagtaccatattactgaagattattctactggaggg
gagcaaggaagtttaagttcaaatccctccatcgatccagagtgcagtgaagaaagtgag
gatgaggatgctgaaatggatggacttcgaagatcaaaaaggaaaaaacaaaaggctgac
aacgaagtcgtgacttcctctggtaggtgtgtcaaaagaaggaatttggatgagtgtgct
gccaattcatccagaagtaacagagcaaggaaatcaaggcatggacgaaaagcttcaaga
aagaaatgttcctcatcgttgagacctcaaagagctgctgcacgtaatgctcttagtcta
ttttctaagattactggaagatctgcagatggagaagatgaagatggatcggaagatgat
atgtcaggaagtgaatccccatttcaagattccaacattgagagtgatgaatctgataaa
caaaatgagcaaggcaagcattcgaaaggaaaagaggttttaatcgatgagtctgaagac
atggttaaaccttttgaagagtttccagtaaatactgggagcaggaggagattggtgctt
aaattaccaagacgggagtcaaataagcttgtgtctagagaaagcacagtaaataatcgt
agtaatgagggtgatttggttgaccaatcatatagagtacctcaagaagcaaatgagaat
aacactagtcctcaggatccaatgtcctccccaggtgacgaaaaatgcagcaaatttgaa
acagcagtgagtgggcagtcacagagagtaaaaaatcatttaaatttcaaagggagaatt
agttggggagggtccagagcacgaacaacaaagcgccagagatcaggagaattcatgtca
ttggatgcacttgccagagccagtgcagttgttggtcacaatgaaaaagactacacaaaa
cctgaaaatgattctcctcattcagaaagccaaaggttcagggataagatggacacagtg
gctatagggaatgagaaaaccactagggctagtacctccgatggccttagtggtgaagtc
aatgttaaagagcattcagattttagtgaatgcaaggatcacgatcaattgcctaaatct
gttcacatggctccttgggatgcaagcacttccttttgccttgataaggacgggactggt
ttctcttttgaacaaaatgagaagctcttacctgtctcaacgaaattaaggtcgaggagg
atttcaaaggatcctagtccttgcaaacaggaaattaactctgtggtagagaacatggaa
aatggtaggacgatggaacagggtccagttgtgccagaggatgatggaacccataaattt
attccagatcatagatatgatggttcacgagaatcagacaatcaatctgataagaatgtt
attgctagcacacatgaatctgtcgaatccagtttacaaaaaaacaaaatgttcagtgct
gtttatagaagggtgaaaccacataggggtagaagtaacttagaaggtgatagtggtgtc
aatggagaaggctgttcatatacttcaaatacaagcaaccacaatatcattgctggagac
attcaggatgacacaactgatggaggatgcaagacacggtccatggggttgaaggcatct
gcatgtgatccaagtagtccagatcatgatcctaagttagcggaaggacatgagccaggt
tatacattgaactggataagttccatggataagtttcaacttgggaatgaagaacgggga
tcaagttcaaggacgaaagttggtttgaggtctactagaaacaggagaagcagttatctt
gacatgagtccaatggataaaaggaagccgcatcagtcaggaaagaaagtatcatggtta
atgttgtcagcacatgaggagagctcaagatatatcccccagttaggggacaaagttgtt
tatctgagacaggggcatcaggagtatttcgatctgggtggattgagagaaaacccacca
tggaggtttataaaggggagaataagggctgtcgaattttgcaatgtccaagacctagag
tattcttcacgtgcagggtctggggatagctgctgtaaattgacaattcaatttgtagat
ccttcttctgatgtgtatggtaaatcttttaagatgactctgccggaagttactggtttc
ccagacttcattgttgaaagaactcgctttgactcttccatggagagaaattggtcgtgt
agggatcattgcaaagtctggtggaaaaatgagggcgaggatgacggtaagtggtggcat
ggcagggttaagtctaaacagtttaaatcatcagagttcccagacagtccttgggagacg
tacactgttcagtacaagagtgatcctagtgatgcacaactacatagtccttgggagctt
tttgatgaaaatactcaatgggagccacctcgcattgatgataaaagtaaaaggaagctg
cattcggcctttgccaaactagagcgatcagccggaagtcgtcaggatccttttggggtt
gacaaactggtgcaacttcaacagaagccaaagtttacaaactggtgtgtggttccgata
tctcttgatgtgatccagtctaggttagagaacgactactatcgaagcctggaagcgctg
aagcatgactttaaggtcatgctggcaaatgctgaaacctatctcgagagcaacgcggtc
aaacgcgcgtcagataaagagcttttagggaaattgaaatgcctatcagactggttcaca
cagacaatatcatccttgtag
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integrated database retrieval system