Pyrus communis (pear): 137736950
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Entry
137736950 CDS
T10779
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137736950
Enzymes [BR:
pcox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137736950
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
137736950
NCBI-ProteinID:
XP_068332376
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Position
6:13711696..13715640
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AA seq
446 aa
AA seq
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MAVFESKKKWVGAFVTVLLVCCFAAAMVSEISRNSNGGTEELQSSSNSSMEARVAEDDEG
FNKHAVEDPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWHKNRKRLADC
GIGFGRNAIGGRDGRFYVVTDPNDDDPVNPRPGTLRHAVIQTKPLWIVFKRDMVIQLKQE
LIMNSFKTIDGRGVNVHIANGACITIQYVTNIIIHGLHIHDCKPTGNALVRSSPTHFGWR
TMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSD
SYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG
NRYAAPTNPFAKEVTKRVETATTQWKNWNWRSEGDLLLNGAYFTPSGAGASASYARASSL
GAKSSAMIGAITSGSGVLPCRRGHPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgagagtaagaagaaatgggtcggtgcgttcgtgacggtgcttctcgtg
tgttgcttcgcagctgctatggtctccgagatctctcgcaacagcaatggaggaacagag
gagttgcagagctcgagcaactcgtcaatggaggccagagtggctgaggatgatgaagga
ttcaataagcatgcggttgaagacccagaagagattgcttccatggttgacatgagtatc
cgcaacagcacggagaggaggaagctgggctacttctcgtgtggaactggcaatccaatc
gatgactgctggcgctgtgatcccaactggcacaaaaaccgcaagcgtcttgcagactgt
ggcattggttttgggagaaatgccattggtggccgcgatggacgcttctatgttgtcact
gaccctaatgatgatgatcctgttaaccccaggcctggtactcttcgccatgctgtcatc
cagaccaagcctctctggattgtgttcaagcgagacatggtgatacagttgaagcaggag
ctcatcatgaacagcttcaagaccattgatggtcgcggagtcaatgttcacattgctaat
ggagcatgcatcacaatccaatatgttacaaatattatcatccacggcctgcacatccat
gactgcaagcccactggcaatgctttggtgaggagctcgcctactcactttgggtggcgg
acaatggctgatggagatgctgtctccatcttcgggtcaagccatatttgggttgatcac
aattccctctccaactgcgctgacggtttagttgatgctgtcatgggctcaactgcaatt
accatttccaacaaccacatgacccaccacaatgaggtgatgctgctgggccacagtgat
agctataccagagacaagcaaatgcaagtcacaattgcttacaaccactttggagaggga
cttatccaaagaatgccgaggtgcaggcacgggtatttccatgtcgtgaacaatgactac
actcactgggaaatgtatgccattggtgggagtgcagaacccaccatcaacagccaaggc
aacagatatgctgctccaaccaacccctttgcaaaggaggttacaaagagggttgagacg
gctaccacgcaatggaagaactggaactggagatcagaaggagacctgctgctcaatggt
gcctacttcactccatctggagccggagcttcagcaagctacgccagggcctcaagcttg
ggagccaagtcatctgccatgattggagccataacttcaggttccggtgtacttccctgc
cgcagaggccacccctgctag
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