Pyrus communis (pear): 137738109
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Entry
137738109 CDS
T10779
Name
(RefSeq) nuclear pore complex protein NUP54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137738109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137738109
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137738109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Motif
Other DBs
NCBI-GeneID:
137738109
NCBI-ProteinID:
XP_068333820
LinkDB
All DBs
Position
6:23142867..23145763
Genome browser
AA seq
389 aa
AA seq
DB search
MFGAQSSSSPFGTPSSTPAFGTPSSTPAFGTPSSTPAFGMPSSTPSFFTPSAPAPAFGTP
STSAFSTGGFGSLFNTPFSSQTQQQQQQTPSFQQPQSAGGFGFQSPFTTPQQPTPFPNSQ
LTTQMAPVSPLPFSLADRDIQAIVDAYKDEPGNPKYAFKHLLFSVTDPQFRVKPAGVSDI
MWAEAMAKLEGLESTDRERLWPQLVQGFKDLSQRLKLQDEVLLSDAERLQMTQSNVKMLQ
RHFQADTLPWIERMRQKEQGLQRRLLRVMRIVEALEGKGFRLPLMKGEVELAEKLAAVTR
QLKGSRAELTRRVQNLLTISRVQENSIGAGGLGYLPGSAKIHEQSLAAMQEVLQQQTEAI
ARLGNVLKRDIRDMEIIMAEDTETTENGN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaatcttcgtcgtcaccttttggtacgccgtcgtcaacccccgccttc
gggacgccgtcgtcgaccccagccttcggcaccccgtcgtcgacgccggcctttgggatg
ccctcttcgaccccgtcgttctttactccttcggctccggctccggcctttggaactccg
tcgacgtctgcattttccaccggtggcttcggctccttattcaacactccattctcttct
caaactcagcagcaacagcagcaaacgccgtcgtttcagcagcctcagtctgctggcggc
tttgggtttcagagcccgttcactacgccgcagcagccgacgcccttccctaactctcaa
ttgacgactcagatggctcccgtctctcctctccctttctctctcgccgatcgcgatatt
caagcaattgttgacgcttacaaggacgagcctggaaaccctaaatatgcttttaagcat
ttgctgtttagcgtaactgatccgcagttcagggtgaagcctgctggtgtatcggatatt
atgtgggcagaggctatggcaaagctcgaaggtctggaaagtactgacagggagcgcctg
tggcctcagcttgttcagggatttaaagatctctctcaacgcctgaagctccaagatgaa
gtccttctttcagatgctgagagattgcaaatgacccaaagcaatgtcaagatgcttcaa
aggcattttcaagctgacacacttccttggatcgaaagaatgagacaaaaagaacaaggt
cttcaaaggcgccttttgagggtgatgagaatagtggaggcactagagggcaagggtttc
cgactgcccttaatgaagggtgaagtagaattggccgagaagttagctgcagttactaga
cagttgaaaggatcgagagctgagcttactaggagggtacaaaacctactaaccatatcc
cgtgtccaagagaattctattggtgctggtggtttaggttatcttcctggatcagccaaa
atccatgaacagagtctcgctgctatgcaagaggtgttgcaacagcagacggaagctatt
gcgagactaggcaatgttttgaagcgagatatccgggatatggagattataatggcagag
gatacagaaacaacagagaacggaaactaa
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