Pyrus communis (pear): 137738776
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Entry
137738776 CDS
T10779
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137738776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137738776
Spliceosome [BR:
pcox03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137738776
Complex C
U5 SnRNP specific factors
137738776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
137738776
NCBI-ProteinID:
XP_068334350
LinkDB
All DBs
Position
7:17922305..17933072
Genome browser
AA seq
2347 aa
AA seq
DB search
MWNNGQIAPPGTGGSSIPPPPAAQPSYTVLPSPADAEAKLEEKARKWQQLNSKRYSDKRK
FGFVESQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVYLGALKFVPHAVYKLLENMPMPW
EQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFD
DEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLS
LPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDE
DWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMVMYIKTEDPDLPAFY
YDPLIHPIPSTNKERREKKTSDEEEDDIFTLPDVVEPFLKDTQLYTDTTAAGISLLFAPH
PFNMRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKK
KHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKT
LTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYTFSHVGQLT
GMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLE
RWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTI
LQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDK
TVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFTPIPFPP
LSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQR
AFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPP
LLVYKWCQGINNLQSIWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYV
TAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPN
EFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYN
NKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSM
SGFEVRILPKIRMSQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQIL
MSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMP
SRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNL
YRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRH
TLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHT
LFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVY
VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIET
VQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAEPKDVFDQKASNKYWIDVQLRW
GDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLIQQ
AMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRV
TIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAAL
VRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILK
ATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTVVTEPHHIW
PSLSDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAE
IEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQSAFGSKTDWRVRAISATNLYLRVN
HIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVKEIRCIAMP
PQWGTHQQVHLPSALPDHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHAKILENTKQWDG
EKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFL
GFYMIPDTGPWNYNFMGVKHTPSMKYGIKLGTPREYYHEDHRPTHYLEFSNLEEGDTVEG
DRDDTFT
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacggccagattgcgccgcctggcaccggtggttcgtcgattccgccaccg
ccggctgctcagccatcttacacggtattgccttctccagctgatgccgaggcgaagctt
gaggagaaggcccggaaatggcagcaactaaattccaagcggtatagcgataagcgcaag
ttcgggttcgtcgagtcgcagaaggaggatatgcctcctgaacatgtcaggaagatcatt
agagaccatggggacatgtcctcaaagaaatttcgtcatgataaacgagtgtatctcgga
gcacttaagtttgtcccccatgcagtttacaagctcctcgagaatatgccaatgccatgg
gagcaggtccgggatgtgaaggttttgtaccatataactggggcaattacatttgtaaat
gaaataccatgggttgttgaacccatctatttggctcagtggggtacgatgtggattatg
atgagaagggagaagagggatcgtcggcatttcaaaagaatgcggtttccaccatttgat
gacgaggaacctccattagactatgctgataatctgttagatgttgatcctctagagcca
attcaattggagttggatgaagaagaagattctgctgtgtatacatggttttatgaccat
aaacctcttgtcaaaacaaagctcattaacggtccaagttataggaagtggcatctgtcg
cttccgatcatggcaactcttcatcgactagcaggacagctgctttctgatcttattgac
cgcaattatttctacctgtttgacatggagtctttttttacagccaaagcactcaacatg
tgcattccaggtggacctaaatttgaaccattgtatcgggatatggagaaaggggatgaa
gactggaatgaatttaatgacatcaacaaactcattattcggtcacctcttagaacagag
tatagaattgcattccctcatctctacaacaatagaccaaggaaggtcaagctctgtgtt
tatcacacacccatggtgatgtacataaagaccgaggatcctgatctacctgcgttttat
tatgatccattgatacacccaatacccagcactaacaaggagcggcgtgagaagaaaact
tctgatgaggaggaagatgatatctttacgttgccggatgttgtggaaccttttctgaaa
gatactcagctttatactgacacaacagctgccggaatctcccttttgtttgccccgcac
ccttttaacatgagatctggtcggacccgtcgtgcagaagatataccccttgtgtccgag
tggtataaggaacattgtcctccttcatatccagttaaagttcgagtcagctatcagaag
ttgctgaaatgttttgtattgaatgagctgcatcacagaccacccaaagctcaaaagaag
aaacatttgtttcgatctctccaagctaccaagtttttccaaactacagaacttgattgg
gctgaagcgggtcttcaagtctgtaagcagggttataacatgctgaatctcttgatccac
aggaaaaatttgaattaccttcaccttgattacaattttaatctgaagcctgtgaagacc
ttgacaacaaaggagcgtaagaaatctcggtttggtaatgcttttcatctgtgccgtgaa
atcttgcggttgacaaagcttgtagttgatgccaatatccaattccgtttgggtaatgtt
gatgcctttcaattggctgatggcttacaatacacgttttctcatgttggtcagttgact
ggaatgtaccgttacaagtacaggttgatgaggcagattagaatgtgcaaagatttgaag
cacttgatttactaccggttcaatactgggccagtgggaaaaggaccgggatgtgggttc
tgggcaccaatgtggagggtgtggttgtttttccttcgtggcatagttcctcttttggaa
cggtggctggggaatttactagcacgtcaatttgaggggcgccattcaaaaggagtggcg
aagactgttactaagcagcgtgttgaaagccattttgacttggagcttcgagctgctgtg
atgcatgatgttcttgatgccatgcccgagggtatcaagcaaaataaggccagaactatc
ttgcaacatctcagtgaggcatggcgttgctggaaagcaaacattccttggaaggtccct
ggtttgccagttcccattgaaaatatgattcttcgttatgtcaaatcaaaggcagactgg
tggacaaatgttgctcattataaccgtgaacgtataagaagaggtgctactgttgataag
acagtttgtcgaaagaatcttggaagattaactcgtctctggctaaaggcggagcaggaa
cgacagcacaattatttgaaagatggtccatatgtcacaccagaagaggcagttgcaatt
tacacgacaactgtgcactggttggagtcaaggaagtttacacccattccattccctcca
ttgtcgtacaagcatgataccaagcttctgatccttgctctggagaggttgaaggagtct
tatagtgtggctgtaagattgaaccaacttcaaagagaagagctgggtctcattgaacaa
gcctatgataatcctcatgaggcattgtcacgaattaagcgtcacttgctcactcagcgt
gcattcaaagaagttggcatagagttcatggacttgtatagctatctgattccagtttat
gagatagaacctcttgagaagattacagatgcatatcttgatcaatatttatggtatgag
ggtgacaaacgtcatctctttcccaactggatcaagcctgcagattcagagccacctcca
ctcttggtttataagtggtgtcagggaatcaataatttgcagagcatatgggatacaagt
gaggggcaatgtgtggtgatgcttcaaacaaagtttgagaagttctttgagaagatcgac
ttgacgatgctaaataggctcctgcggctcgttcttgaccataatattgctgattatgtc
actgcaaagaacaatgtggtgttgtcctacaaagatatgagtcatacaaattcgtatggt
ctcatacgtggtcttcagtttgcatcttttgtagtacaatattatgggcttgtgttggat
ctattacttcttgggctgactcgagccagtgagattgccggtccaccccagatgccaaat
gagttcatcacttattgggatacaaaggttgagactcggcatcctatcaggttgtattct
agatacatagacagggtgcatatcttgttccgcttcacccacgaggaggctagggacctt
attcagcgatatcttactgagcatccggaccccaataatgaaaatatggttggatacaat
aataagaaatgctggccaagagatgctagaatgaggcttatgaaacatgatgtcaatctt
gggaggagtgttttttgggatatgaagaaccgtctccctcgaagcatcacaactttggag
tgggagaacagctttgtgtctgtttacagcaaggataatccaaatttgcttttcagtatg
tctggatttgaagttcggatacttccgaagataagaatgagtcaagaagcatttagtaac
acgagggatggggtttggaatttgcagaatgagcagacaaaggagaggactgcagttgct
ttcttacgtgttgatgatgaacacatgaaggtgtttgagaatcgtgtgaggcagattctt
atgtcttcggggtctacaacgtttacaaaaatcgttaacaaatggaatacagcgcttatt
ggtctaatgacttacttccgtgaagcaactgttcatacacaagaactgttggatttgctc
gtcaaatgtgaaaacaaaattcagacccgtattaagattgggttgaattcaaagatgcct
agcaggtttccacctgtcatattttacacgccaaaagaaattggaggacttggcatgtta
tctatgggtcacatattgattccacaaagtgacctccgttacagtcagcagacagatgtt
ggtgtgactcattttaggagtggaatgagtcatgaagaggaccagctgatcccaaatctt
taccgttacatacagccatgggagagtgaatttatagattctcaacgtgtttgggcagaa
tatgcactgaaaaggcaggaagctcaggcacaaaataggcgtctgactcttgaagatttg
gaagattcatgggataggggaataccacgcataaatactttgttccagaaggaccggcat
actttagcatatgacaaaggatggagagttcggacagattttaagcagtaccaggtgttg
aaacaaaatcctttctggtggacacaccagaggcatgatggaaagttatggaacttaaac
aactaccgaactgatgtgattcaagcccttggaggtgttgaaggaatccttgagcataca
ttattcaaaggaacatactttcctacatgggaggggctcttctgggagaaagcatctggt
tttgaggagtcgatgaagtataaaaagttgaccaatgcacagagatctgggctcaatcaa
atccctaatcgtagatttactctttggtggtcacctaccataaatcgggccaacgtatat
gttggtttccaagtgcagctagatttaactggaatatttatgcacgggaagattccaacc
ttgaagatatcactgattcagatattccgtgctcacttgtggcagaagattcatgaaagt
gttgtcatggatctttgtcaggttttggatcaagagttggatgctttggaaattgaaact
gtgcagaaagaaacgatacatcccaggaagagttacaaaatgaacagctcttgtgctgac
attcttctgtttgctgcccatcgatggccaatgtcaaaacctagtcttgtagctgagccc
aaggatgtctttgaccagaaagcgagcaataagtactggatagatgtacaactgcgttgg
ggagattatgattctcacgatattgagcgttacacccgagcgaagtttatggactatacc
actgacaacatgtccatctatccttctcccacaggggtgatgattggtcttgatttggcc
tataatttgcattctgcatttggtaactggtttcctggttcaaaacccctgattcaacag
gcaatgaacaagatcatgaaatcaaatccagccttatatgtcctgagggagcgaataagg
aaaggattgcagctatattcttctgagcctacagagccatatttatcatcccaaaactat
ggggagatcttcagcaatcaaattatttggtttgttgatgacaccaatgtgtatcgtgtt
acaatccataagacatttgaaggaaatctcactacaaaaccaatcaatggtgctatcttc
atattcaatccaaggacggggcagttattcctgaaggttatccacactagtgtctgggca
ggacagaagcgtcttggtcagttggcaaagtggaaaactgcagaagaagttgctgcactt
gtgcgttctttgccagtggaagaacagccaaagcaaattattgtgactcgtaagggaatg
ttggatcccttagaggttcatttgctcgatttccccaacatagtcataaaaggaagtgag
ctgcagcttccttttcaagcttgtttgaagattgagaagtttggtgatctgatattgaag
gctactgaaccacagatggttcttttcaatatttatgatgattggttgaagagtatttca
tcatacactgcattctctcggctaattttgattcttcgtgctcttcatgtgaacaatgag
aaggcaaagatgttattgaagcctgataaaacagtcgttaccgagccacatcacatctgg
ccttctctttctgatgatcaatggatgaaggttgaggttgctcttagggatctcatattg
tcagactacgcaaaaaagaacaatgtgaatacatcagccctaacacaatctgagatccgt
gacattatacttggagctgagatcaccccaccttcgcaacagaggcagcaaattgcggaa
atagaaaaacaggccaaagaagccagccagctgacagcagtcacaacaaggactacaaat
gtgcatggtgatgaactcattgtcaccactactagtccctatgagcaaagtgcatttggc
tccaaaactgattggcgtgtgagagcaatatcagctacaaatctatatctccgtgtcaat
catatatatgtgaattcagaagatattaaggaaacgggttacacctatattatgccaaag
aacattttaaaaaagttcatctgcattgcggatctgaggacgcaaatagctggttacttg
tatggcataagcccacccgataaccctcaggtcaaggaaatccgctgcattgcaatgcca
ccacaatggggtacccaccagcaagttcatcttccatcagctcttcctgatcatgatttc
ctcaacgatttggagcctctgggatggatgcacacacagccgaatgagcttcctcagctt
tctcctcaggatctcacttctcatgctaagattttagagaacaccaagcaatgggatggg
gagaaatgcatcattttaacctgcagtttcactccaggttcctgctccttaactgcgtac
aagcttactccatctggttatgaatggggacgtgtcaataaagacacaggaagcaatcct
cacggataccttcccactcattacgagaaggtgcagatgcttctcagtgaccgcttcctt
ggtttctatatgattccggacactggtccatggaactacaacttcatgggggtgaagcat
acgccgagcatgaagtacggcatcaagcttggaacacccagggagtactatcatgaggac
caccggccgacccattaccttgagttcagcaacctggaggagggtgatacagtggaagga
gatcgcgatgatactttcacataa
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integrated database retrieval system
