Pyrus communis (pear): 137739792
Help
Entry
137739792 CDS
T10779
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137739792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137739792
Spliceosome [BR:
pcox03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137739792
Complex C
U5 SnRNP specific factors
137739792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_2
TPR_8
ubiquitin
ARM_TT21_C
TPR_1
IgD_del_linker
PAP_PilO
Motif
Other DBs
NCBI-GeneID:
137739792
NCBI-ProteinID:
XP_068335603
LinkDB
All DBs
Position
7:25138915..25142354
Genome browser
AA seq
1026 aa
AA seq
DB search
MVFITSPNHKTLTLNLNPKTTTLQALKLQIEQNSHIPIPLQRLFISQSLQLLTQSDSALL
SDLGIRPLSTLTLHIPVFGGTQPPAVPKPRLEFLNSKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSATTIGGAAAPAAPPGVGRGRGKPDEEEEDEGEDKGYDENQKFDEFEGN
DVGLFASAEYDDEDKEADAVWEAIEQRMDSRRKDRREARLKEEIEKYRASNPKITEQFAT
LKRKLYTVSAQEWESIPEIGDYSSRNKKKRFESFVPVPDTLLEKARQEKEHVTALDPKSR
GAGGTETPWSQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKIT
SDAEISDIKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKIQAARQLIQKGCEECPKSE
DVWLEACRLSSPDEAKSVISKGVKSIPNSVKLWMQAAKLERDDLNRSRVLRKGLEHIPDS
VRLWKSVVELANEEDARLLLHRAVECCPLHIELWLALARLETYDNARKVLNRAREKLSKE
PAIWITAAKLEEANGNTAMVGKIIERGIRALQREGLAIDREAWMKEAEAAERAGSVATCQ
AIIRNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQL
EKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEE
IWLAAFKLEFENHEPERARMLLAKAREKGGTERVWMKSAIVERELGNINAERKLLDDGLK
RFPSFYKLWLMLGQLEERLGHLEKAKEAYDSGLKYCSSSIPLWLSLANLEEKMTGLSKAR
AILTMARKKNPQNPELWLAAVRAELRHGNKKEADILMAKALQECPNSGILWAASIEMVPR
PQRKTKSMDALKKCDHDPHVIAAVSKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYK
FELQHGTDENQKDVLKRCIAAEPKHGEKWQPISKAVENSHQPTEAILKKVVVALGKEESA
AEHNKQ
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatcacatcccccaatcacaaaaccctaaccctaaatctaaaccctaagacc
accactctccaagccctaaagctccaaatcgagcaaaattcccacatacccattcctctg
cagcgcctattcatctcccagagcctccaattgctcacccaatccgactccgccctcctc
tccgacctcggaatccgacccctctcaaccctaactcttcacatccccgtattcggcggc
acccaacctcccgccgtccctaaaccccgcctcgagttcctgaactccaagcctcccccg
aattatgtcgccgggctcggccgtggggccactggctttaccaccaggtctgatatcggg
cccgcacgtgccgcgcccgacctgcctgataggtcggccaccacaatcggaggcgctgct
gctcctgctgcgccgcctggggtcggccgagggcgcgggaagcccgacgaagaggaggag
gatgaaggggaggataaagggtacgatgagaatcagaagtttgatgaattcgaagggaat
gatgttgggttgtttgcatcggcggaatatgatgatgaggacaaggaggctgatgcggtg
tgggaagccattgagcaaagaatggactcgcggaggaaggacaggagagaagcacggttg
aaagaagagattgaaaagtacagagcttcgaacccaaagatcacagagcagttcgctact
ctgaagaggaagttgtacactgtgtctgctcaggaatgggagagcataccagaaattgga
gactattcgtcgaggaacaagaagaagagatttgagagctttgtgccggtgcccgataca
cttttagagaaagcaagacaggaaaaggagcatgttacggcattggaccccaagagtagg
ggagctggtggtacggagactccgtggtctcaaactccggttacggatttgactgctgta
ggtgagggtagaggtactgttttgtcattgaaattagataggctttctgattctgtttct
ggattgacggttgtggacccgaaagggtaccttactgatcttaagagtatgaagattact
agtgatgccgagatttcggatattaaaaaggctaggttgttgcttaagagtgttatacag
acgaatccaaagcacccacctggttggattgcagctgcaaggctggaggaggtggctggg
aagattcaggcagctagacaattgattcagaaagggtgtgaagaatgtcctaagagtgag
gatgtgtggttagaggcgtgtaggctttcaagccctgatgaagctaagtccgtgatttct
aagggagtgaagtcgattcccaattcggtgaagttgtggatgcaggctgcgaaattggag
cgtgatgatttgaataggagcagggtattgaggaaaggtttggaacacattcccgattct
gttaggctatggaagtcagtggtggagcttgccaatgaggaggatgcgagacttctgctt
catagggctgtggagtgttgtcccttgcacattgagttatggcttgcacttgcaagattg
gaaacttatgataatgcgaggaaggtccttaatagggcaagagagaagttatcaaaagag
cctgccatttggatcacagcagcgaagttggaggaagctaatgggaacacggccatggtt
gggaagattattgaaaggggtataagggctttgcaaagagaagggttggcgattgataga
gaggcatggatgaaggaggctgaagctgctgagcgtgcagggtctgttgcaacttgccaa
gcaatcattcggaacacaattgggattggtgtggaggaagaggatagaaagaggacatgg
gttgctgatgctgaggaatgcaagaaaaggggttccattgaaacagccagagctatttat
gcacacgcacttactgtctttctaaccaagaagagcatatggctcaaagccgcacagctt
gaaaagagccatgggactagggaatctcttgatgccttacttcgtaaagcggtgacatac
cgaccacaggctgaagtcttgtggcttatgggagctaaggagaagtggcttgctggggat
gtgcctgctgctcgtgccatccttcaagaagcttatgctgccattcccaattctgaagaa
atttggcttgctgcatttaaacttgaatttgagaaccatgaaccagagagagctagaatg
cttcttgccaaagcccgagaaaagggaggcactgaaagagtgtggatgaaatcagcaatt
gttgagagagaattagggaacattaatgcggagaggaagttgcttgatgatgggttgaag
cgcttcccttccttttataaattatggttgatgcttggacagctagaggaacgccttggt
catttggagaaagccaaggaggcctatgattcgggtctgaagtactgctccagttctatt
ccactgtggctttctcttgctaatcttgaagagaagatgactggtctgagtaaagctcgt
gcaattctgacgatggcccgaaagaagaatcctcagaaccctgaattgtggcttgctgct
gttcgagctgaattaaggcatggaaataagaaggaagctgatatcttgatggcaaaggct
ttgcaggagtgtcccaatagtggtatattgtgggctgcgtccattgagatggtaccccgt
ccacaacggaagacgaagagtatggatgccctgaagaaatgtgatcatgatccccatgtc
attgctgctgtgtctaagttattttggcatgacaggaaggttgacaaagctaggacttgg
cttaacagggcagtgacactagcgccagatattggggatttctgggctttatactacaaa
tttgaacttcaacatggaaccgatgagaaccagaaagatgtacttaaaaggtgcatagct
gcggaaccaaagcatggtgagaaatggcaacctatttcaaaggccgtggagaactcccac
caaccaactgaagccatcttgaagaaagtggtggttgctcttgggaaggaagagagtgca
gctgaacataataaacagtag
DBGET
integrated database retrieval system
