Pyrus communis (pear): 137739818
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Entry
137739818 CDS
T10779
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcox03036
]
137739818
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
137739818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PHD_2
PDS5
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
137739818
NCBI-ProteinID:
XP_068335634
LinkDB
All DBs
Position
7:complement(3296230..3308165)
Genome browser
AA seq
1808 aa
AA seq
DB search
MSYPVATSSSSFGSAHGGISLSNTVHSEVAPCLPLPSLPVFCGASDHLRLFDEPSRNSAW
LNRPDAAVASRIADLLRETDVSYLNLREDARAVPYGYGESLKLHDEVLQYNPEAFEYNSP
GPIKGQVPVSSTISDKKPFKPIVPIPKLSQRDYSVSDNNQLNDIPPNDISPPSSRKPKSK
KKASDTVTSTVGPDSAEIQDATIRSFCELVEDFCGRAEIFSDDREETEWFSMPLSDLRVL
ANEIMSLRAKKLLHLVPVDTFVRLLRILDHQIHRAEGLTIIEYEQSNSDVVSSIQCALES
IHAALAVMAHNQMPKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHRPSQNGSLEVE
EDAEPDAEFGSASKKRRSIKTVKVQKSSFNRVSAAVNNILQKMCTILGLLKDLLLIERLS
DGCILQLVKTSFTTFMVDNIQLLQLKAMGLISAIFYSYTQHRTYVIDELIQLLWKLPVSK
RALRAYHLPDEEQRQIQMITALLIQLVHYSANLPQSLRQESSGNSILELSVNADYPTKGH
EAATEACCHFWTRVLQRFASAKAQEASELKVMMENLVTDLLTTLNLPEYPASAPILEVLC
VLLLQNAGLKSKDIAARTMAIDLLGTIAARLKRDSVLCSSDKIWILQELVSDDGLDQTYP
RDACSVCLDGRVEKNVFVCQGCQRMFHADCMGVREYEVPNRSWHCQICLCRKQLLVLQSY
CKSQCKDEGTKDRSRSGRNIEVAFSITKPEVVQQMLLNYLQDTTSADDGHLFVRWFYLLL
WYKDDSKSQQKLMYYLARLKSKEIVRDSGTVFSLLTRDSVKKITLALGQKNSFSRGFDKI
LHLLLASLMENSPVIRAKALRAVSIIVEADPQVLGDKRVQSAVEGRFCDSAISAREAALE
LVGRHIASHPDVGLQYFEKVAERIKDTGVSVRKRSIKIIRDMCISNANFSEFTSACIAII
SRISDDESSIQDIVCKTFYEFWFEEPAGSQTHFFGDGSSVTLEVAKKTEQIVEMLRRMPS
HQPLVTVIKRNLALDFFPQSAKAVGINPVLLASVRNRCELMCKCLLEKILQVEEMNIQEV
DRQALPYVLALHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQADNRVVAQLVESIIFIID
AVLPLVRKLPQTVVGELEQDLKNMIVRHSFLTVVHACIKCLCAVSKVAGKGAAIVENLIQ
VFFKRLDAQAVDNKQQVGRSLFCLGLLIRYGNSLPSNSNRTIDVVSSLSLFKKYLLVDDF
VIKVRSLQALGFVLIARPEYMLEKDIGKIVEATFSSSSDVRLRMQALQNMYDYLLDAESK
MGTDAASDNVIHCNVEGGNAVSVAAGAGDTNICGGIVQLYWDNMLVRCLDLNEQVRQSAV
KIVEVVLRQGLVHPITCVPYLIALETDPLEANSKLAHHLLMQMNEKYPAFFESRLGDGLQ
MSFSFIQSISTSSEHENKKIQAKASGNAKGKSDNVSLAQARLGVSRIYKLIRANRTSRNK
FMSSIVRKFDNTSWTPSVVPFLMYCTEILALLPFTTPDEPLYLVYSINRVVQVRAGALEA
KLKALTLHLLQRSAPHGNGIIEDGSAAQPFTRGMASLDLNGTVQQEPVFQPVANYMSTEW
NGIIQQEPADQSVSNQATPFEANMHVTGSNSSGGFSIDDVQKFQADCQAAIAVQLLLKLK
RHLKIVYSLNDARCQAFSPGEPLKPGDVLSRQNIPFDLSDTRTNLPTTYQELVQRYQEFK
NALREDTIDFSTYTANIKRKRPAPRKGRKSVGGDDEGNDDDEDYSGGARRPSNIGRRGGY
GIRSRQRL
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccggtagccacttcgagctcgagcttcggctcggctcacggaggtatcagc
ctctcgaacacggtgcactctgaggtcgcgccttgcttgcctctgccctcgcttccggtg
ttctgcggggcatctgatcacctccggctgttcgacgagccgagtcggaacagtgcgtgg
ctgaaccgccctgacgcagctgttgcgagtaggattgctgatctgcttcgagaaaccgac
gtgtcgtacttgaaccttagggaggatgctagggcagttccatatggttatggagaatct
ttaaaacttcacgatgaagttcttcagtacaatccagaagcatttgagtacaatagtcca
ggtcctattaaggggcaagtgcctgtcagtagtacaatatctgacaagaagcccttcaag
cctattgtacctataccaaagctttctcaaagggactattctgtatctgacaataatcag
ctcaatgatattcctcctaatgacatatctccaccatcttctagaaaaccaaaatccaag
aaaaaagctagtgataccgttacgtcaacagtcggaccagattctgctgaaattcaagat
gccaccatcagaagcttttgtgagttggtggaggatttctgtggcagagctgaaattttc
agtgatgaccgggaagaaactgagtggttttctatgcctctttctgatcttagagtgctt
gcaaatgaaataatgtctcttcgagcaaagaagcttctacatttggttcctgtagatact
tttgttagattgttaaggattttagatcatcagatacatcgagctgaaggcttgactata
attgaatatgagcagtcaaactcagatgtggtttcatcaatacaatgtgcactggagtcc
attcacgcagcattagcagtaatggctcataaccagatgccaaaacaactatataaagaa
gagatcattgaaagaattctggagttttccaggcatcagataatggatgttatgtgcgct
tatgatccatcatatcgtgctttgcataggccaagtcaaaatgggtcgctcgaagttgag
gaagatgcagagcctgatgctgaatttggttcagcaagcaagaagagacgcagtatcaag
actgttaaagtgcagaaatcctcatttaacagggtctctgctgctgtgaataatattctt
cagaaaatgtgcaccattcttggtttactcaaggatttgttgttaatagaaaggttgtca
gatggttgtatcttacaactagtgaaaacaagctttacaacatttatggtggataatatc
cagctcttgcaactgaaggcaatgggtttaatcagtgcgatattctattcatacactcag
catcgcacgtatgtgatagatgaattaattcagttgctttggaagttgccagtctcgaag
cgagctttgagagcctatcacctacctgacgaagagcaacggcagattcagatgatcact
gctttgctgattcagttggttcactatagtgcaaaccttcctcaatcattaagacaggaa
tcaagtggtaattccatcttagaactttctgtcaatgccgattatccaactaaaggtcat
gaggcagcaacagaggcatgttgtcacttttggactcgtgtacttcagcgctttgctagt
gcgaaggctcaggaagcttcagagttgaaagtaatgatggagaatcttgttactgatctc
ttgacaacattgaatttaccggaatatcccgcttcagctcctattctggaggttctttgt
gtcttgttactccagaatgctgggctgaaatctaaagacatagctgcacgtaccatggct
attgaccttctcggcacaattgctgcaaggttgaagcgtgattctgtactttgcagtagt
gacaaaatctggatacttcaggagttggttagtgacgatgggcttgatcagacatatcca
agagatgcatgctcagtttgtttagatggtagggttgaaaaaaatgtctttgtatgtcaa
ggttgtcagagaatgtttcatgctgattgcatgggagtgagagaatatgaagttccaaat
cgaagttggcactgtcagatatgcctctgcaggaagcaacttcttgttttacaatcctat
tgtaagtcacaatgcaaagatgaaggaaccaaggatcgaagtcgttcaggaagaaacatt
gaagttgctttttcaattacaaaacctgaggttgtccaacagatgcttttgaattacctt
caagataccacatcagctgatgatgggcatctctttgttcgctggttttatctcttgttg
tggtacaaggatgattcaaaatcacagcagaagctcatgtactatcttgctcgactgaaa
tcaaaagaaatagttcgggattctgggactgttttttcattattgacaagggattcagtc
aagaaaattactttagcattggggcaaaaaaactctttctccagagggtttgataagatt
cttcatttgcttctggcaagcttaatggagaattctcctgtaatcagggccaaggcttta
cgagcggtcagtataattgtagaagctgatccgcaggtattaggagataaacgagttcaa
tcagctgttgaaggaagattttgtgattctgcaatttctgcaagagaagcagcactggaa
cttgtaggaaggcatattgcttctcatcctgatgttggtttgcagtattttgaaaaggtt
gctgagagaattaaagatacaggagttagtgttcgaaagcgatccatcaaaatcatacga
gatatgtgcatttcaaatgcaaacttctccgaattcacaagtgcctgcattgctatcatc
tcccgtattagtgatgatgaatcaagtatacaggatattgtttgcaagacattttatgag
ttctggtttgaggaacctgctggttcacaaactcatttctttggagatggtagctctgtt
acattggaggtggctaaaaaaactgaacagatcgttgagatgttgaggaggatgccaagt
catcaacctcttgtgacagtcattaaacgcaacttagcccttgatttttttccacaatcg
gctaaagctgttgggatcaaccctgtcttacttgcatctgtacgcaaccgctgtgagtta
atgtgcaagtgcttactagaaaagatattgcaggtagaggaaatgaatatccaggaggta
gataggcaggcacttccatatgtactagctttgcatgcattctgtgttgtggatccaaca
ctttgtgcaccggcttctgacccttcacagtttgtggtcactcttcagccttatctaaag
agtcaggctgataatcgagtggttgcacagttagtggagagtataatctttataattgat
gctgttctgcctttggtgagaaagttaccacaaactgttgtgggagaacttgaacaagac
ttaaagaacatgattgttcggcattccttcttgactgttgtgcatgcttgcataaagtgc
ctctgtgctgtgagtaaagtggcaggaaaaggtgctgctatagtggagaaccttatccag
gtgttcttcaaacgtttggacgctcaggcagtagataacaagcagcaagtggggcggtct
cttttctgtctcggattgcttatccgttatggcaactctttgcccagtaactccaacaga
acaattgatgttgttagcagtctcagcttgtttaaaaaatatcttctagtggatgatttt
gtaataaaggttcggtcattacaggcattgggctttgttctaatagctaggcccgaatat
atgttggaaaaagatattgggaagatagtagaggcaacattctcttctagctctgacgtt
cgtcttaggatgcaagcattgcaaaacatgtacgactatcttcttgatgctgaaagtaaa
atgggaacagatgcagctagtgataatgtgattcattgtaatgtggaaggcggcaatgct
gtatctgttgctgcgggtgccggagatactaatatctgtggtggtatagttcagttgtat
tgggataatatgttggtgagatgtttagaccttaatgaacaagttcgccaatctgcagtt
aagattgttgaagttgtgctgcgccaagggctcgtacatcctattacatgtgttccatac
cttattgcactcgaaacagatccactggaggccaattcaaagttagctcatcatttgctg
atgcaaatgaatgaaaagtacccagcatttttcgaaagccgcctgggagatggccttcaa
atgtcttttagtttcatacagtccataagtactagttctgaacacgagaacaaaaaaatt
caagcaaaggcttctggaaatgcgaagggaaaatctgataatgtttctctcgcacaagca
agactaggggtttctcgaatctacaagcttattcgtgctaaccggacttcaagaaacaaa
tttatgtcttcaattgttcgcaagtttgataatactagctggacaccttcagtagtccct
ttcctaatgtactgcacagagatactcgccttgctacccttcacaacacctgatgagcca
ctttacttggtctattctataaatagagtagtacaagtgagggctggggcgctcgaagca
aaactgaaagctctgactttgcatttgttacaaagaagtgcacctcatgggaacggcata
attgaagatggttcagctgctcaaccttttacgagaggaatggcgtcattggatttgaat
gggacggttcaacaagaaccggtgtttcaaccagttgcaaattatatgtcaacggagtgg
aatggtataatacaacaagagccagcagatcagtctgtctcaaatcaagctaccccgttt
gaggcaaacatgcacgttacgggctccaacagttccggtggcttctcaatagatgacgta
cagaaattccaggcagactgccaggcagctattgcggtgcagcttcttttgaaattaaag
agacacctaaaaattgtgtacagcctgaacgatgcaaggtgccaggctttttctccgggc
gaaccccttaaaccgggagatgtactctccaggcagaacattcctttcgacctcagtgat
acccgcaccaatttgccaacaacttatcaagaattggttcaaagatatcaggaattcaag
aatgcgttgagggaggatacgattgatttctcaacttacactgcaaacatcaagagaaaa
cggccggcccccagaaaagggcggaaatctgtggggggagatgacgagggcaatgatgac
gatgaggattattcaggcggggctcggaggccgagtaatattggaaggagaggtggctac
ggtattagaagtcgacagcggttatag
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integrated database retrieval system
