Entry
Name
KO
Organism
pcox Pyrus communis (pear)
Pathway
Brite
Ubiquitin system [BR:pcox04121 ]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
137739951
DNA repair and recombination proteins [BR:pcox03400 ]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
137739951
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Other DBs
LinkDB
All DBs
Position
7:2536478..2540092
Genome browser
AA seq
733 aa AA seq DB search
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTCHLKDISKSIEAAQGELFLEELNRKWADHNKALQMVRDILMYM
DRTFIPSTHKTPVHELGLNLWRDVVIHATKTQLRLLDTLLELVHRERSGEVINRGLMRNI
IKMLMDLGSTVYQDDFEKHFLEVSADFYRCESQEFIESCDCGNYLKKAERRLMEEMERVS
QYLDARSEAKITNVVEKEMIENHMNRLVHMESSGLVNMLVDDKYDDLGRMYSLFRRVQNG
LVIVRDVMTAYIRDTGKQLVTDPERLRDPVDFVQRLLDLKDKYDKVISSAFNNDKTFQNA
LNSSFEYFINLNARSPEFISLFVDDKLRKGLRGVSEEDVEVVLDKVMMLFRYLHEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHEFYS
TVGAQLGDSPTLTVQVLTTGSWPTQPSATCNLPAEILWVCEKFKSYYLGTHTGRRLSWQT
NMGTADLKSTFGKGQKHELNVSTYQMCVLMLFNDADRLTYKKIEQATEIPAVDLKRCLQS
LACVKGKNVLRKEPMSKDIAEEDVFFFNDKFTSKSFKVKIGTVVAQRESEPENQETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQARFLPNPVVIKKRIESLIEREFLE
RDKMDRKLYRYLA
NT seq
2202 nt NT seq +upstream nt +downstream nt
atgagtgctcagaagaagaggaacttccaaattgaggccttcaagcatcgggtcgtggtt
gatcccaagtacgctgagaagacgtggaagatcctggagcatgcgattcatgaaatttac
aatcacaacgctagcgggcttagcttcgaggagctctacaggaatgcttacaatatggtg
ctgcacaaatttggagagaaactctactctggtctggtgacaaccatgacttgtcatcta
aaagatatatctaagtcaattgaagctgcacagggtgagttgtttttggaagagctgaac
cggaagtgggcagaccataacaaagcgttgcagatggttcgagacatattgatgtacatg
gacaggactttcatcccaagcacccacaaaacccctgttcatgagcttgggttaaacctg
tggagggatgttgttatccacgctaccaaaacccagttgaggctgttggatacacttctt
gagcttgtgcatagagaaaggagtggtgaagtaattaacagaggcttgatgaggaatatt
ataaaaatgttaatggatttaggttctactgtttatcaagatgactttgagaagcatttt
cttgaggtttcagctgatttttaccgctgtgagtctcaggagttcatagagtcatgtgat
tgtgggaactatttaaagaaggctgagagacgcttaatggaagaaatggaaagagtctcc
cagtatttggatgctagaagtgaagctaagataactaatgtggtggagaaggagatgatt
gaaaatcacatgaacagactagttcatatggagagctcaggtttagttaatatgcttgtg
gatgacaaatatgacgacttgggaagaatgtatagcttgtttcgcagggtgcagaatgga
cttgtaatagtacgagatgtcatgaccgcttacatccgagatactggtaagcagctagtt
actgacccagaaaggttaagggatcctgtagattttgtgcagcgtctcctggatttgaag
gataaatatgacaaagttatcagctcggcgtttaacaatgacaaaacattccaaaatgct
ctaaattcctcctttgaatacttcattaatttgaatgcccggtccccagagttcatatct
ctgtttgtggatgacaagcttcggaaaggtctaagaggggttagtgaggaggatgtagag
gttgtactggacaaggtcatgatgcttttccgttatcttcatgagaaagatgtctttgaa
aagtattacaagcaacacttggcaaagaggcttctttctgggaagactgtttctgatgat
gcggaaagaagtctgattgttaagctcaaaacagagtgtggatatcagtttacttctaag
ttggagggtatgttcactgatatgaagacctctcaggatacaatgcatgaattctactca
actgtcggagctcagttaggcgacagcccaacactaactgtccaggtcctcaccacaggt
tcatggcctactcaaccaagtgcgacctgcaaccttccagcagaaattttgtgggtatgt
gagaagttcaagagttactatcttgggacccatactggccggagattgtcctggcaaact
aatatgggcacagctgatttgaaatcaacctttggaaagggccagaagcatgagctgaat
gtttccacatatcagatgtgtgtactgatgctatttaacgacgctgaccggttgacgtat
aagaaaatagagcaggctacagagataccagccgttgacttgaagaggtgcctgcaatct
ctggcatgtgtcaaggggaagaatgttcttcggaaggagccaatgagcaaggacatagct
gaggaggatgtcttcttctttaatgacaagttcacaagcaagtccttcaaggtaaagata
ggtactgtggttgcacaaagggagtccgaaccagaaaatcaagaaacccgacagagagta
gaggaagacaggaagccccagattgaagcagcaattgtgaggatcatgaagtctaggcgg
gtcctggatcacaataacattgtcgcggaggtgacgaaacagctgcaggcgcgattcttg
cccaaccctgttgtaataaagaaacgaatcgagtccctcattgagcgggagtttttggag
agggataaaatggatcgaaaattgtacaggtaccttgcttga