Pyrus communis (pear): 137740141
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Entry
137740141 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137740141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137740141
03009 Ribosome biogenesis [BR:
pcox03009
]
137740141
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137740141
Spliceosome [BR:
pcox03041
]
Complex A
U1 snRNP components
U1 related factors
137740141
Complex B
137740141
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Helicases
137740141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
137740141
NCBI-ProteinID:
XP_068336055
LinkDB
All DBs
Position
7:13058651..13064533
Genome browser
AA seq
505 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRRSDSGFGGATGYGGSTRSSSSRRENDGAESPGKLDLDGLIPFE
KNFYVESPELEKMSEVEVEEYRKRREITVEGRDVPKPIKSFRDTGFPEYVLEEVTKAGFV
EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
TRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY
NPYKVIIGSPDLKANHSIRQIVDIITENQKYNRLVKLLEDIMDGSRILIFMDTKKGCDQI
TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYD
FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIALLEEAGQKVSPELAAMGRG
APPPPSGHGGFRDRGRGYGGGRPWN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccggcgaccccacttcctaccgtgaccggagaagtgat
tccggttttggtggggcaaccggctatggtggctcaacacggtcttcttcaagcaggagg
gagaatgatggtgctgagtcaccagggaagttggatttggacggattgataccttttgag
aagaatttctatgttgagtcgcctgaattggaaaaaatgtcagaggtggaggttgaggaa
tataggaaacggagggaaattactgttgaaggccgtgatgttccaaaacccatcaagagt
ttccgtgacactggatttccagaatacgttttggaagaagttacaaaggctggatttgtg
gaacctacaccaatccaagctcaaggatggccaatggctttgaaaggtcgtgatctcatt
ggtattgctgaaacaggatcagggaagacactagcctacctgttgcctgcaattgtccat
gtcaatgcccaaccaattctatctcctggagatggcccgatagttctagttttagctcca
acccgtgaactcgctgttcaaatccaacaagaggctactaaatttggttcatcgtcgaaa
attaaaagcacatgcatatatggtggggttccaaagggacctcaagttcgtgatctgcag
aaaggagttgagattgtaattgctacacccgggaggttgattgatatgatggaatcacat
cataccaacttgcgaagggtcacttaccttgtattggatgaagctgatcggatgctagac
atggggtttgatccacagataaggaagatcgtttcacagattcgcccagaccgtcaaaca
ttatactggagtgctacctggccaaaggaggttgaacaactggcaaggcagttcctctac
aacccatacaaagtgataataggttctccagatttgaaagctaaccattcgatccgccaa
atcgttgacatcattactgaaaatcagaaatataacagattggtgaaattgcttgaggat
atcatggatggcagcagaatactgatattcatggatactaagaaaggatgtgatcagatc
actcggcagctccgcatggatggttggcctgctctttcgattcatggtgacaagagtcaa
gcagaaagggattgggttctctctgagtttaaagctggcaagagccccataatgactgca
acagatgttgctgctcgtggtctagatgtgaaggatgtgaaatttgttattaactatgat
tttcctggatcccttgaggattatgttcaccgcattggccgaaccggaagagctggggca
aaaggaacagcttacacattctttacagctgctaacgctaggttcgcaaaggaacttatt
gccttgcttgaggaagctggacagaaggtcagtcctgagttggcagcaatgggtcgtggt
gcaccacctcccccttcaggtcatgggggctttcgagatcgtggtaggggctatggaggc
ggtcgtccttggaactga
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