Pyrus communis (pear): 137741469
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Entry
137741469 CDS
T10779
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
pcox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137741469
03015 mRNA surveillance pathway
137741469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137741469
03041 Spliceosome [BR:
pcox03041
]
137741469
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137741469
Spliceosome [BR:
pcox03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
137741469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
137741469
NCBI-ProteinID:
XP_068337275
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All DBs
Position
8:21775761..21780711
Genome browser
AA seq
851 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDITKVSMDVMRPWIANRVTELL
GFEDEVLINFIYGLLEGKVVNGKEIQISLTGFMEKNTVKFMKELWTLLISAQNNASGVPQ
QFLDAKQEEARKKKEEADKFASDIQRKKEKERIDQQEILKKMEEGADKKANSAALEPSTK
RMSPRDSNDHYEDERGAEKRIGVKARSKVSRSPNSENSSLSPRERHRSRSISKSPKALRR
SISSDRSDRSSPRRPITTVRRHSPEGSTSPRGRSRYSRQRSRSNSQQRSPSPYRRRVRSP
YWRRPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRHRSPSPVRRRRSPSPVRRRRSPS
PIRRPRSPSPVRRPRSPSPVRRPRSPSPVRRRRSPSPLRRRRSPSPLRRRRSRSPVRRRS
PSPVRRAYRRSPLNTRNRYVSPLQHRSPVRSRRSPTPPHRSPSPHDRSSSPIQHGSPSPI
RRTSKLQRSPSQSPQERTRSREKISPVPHRSSSYGSLQRELKNGNDSRKRAPDLSPSPVR
SRLLSESPPGVRSDSEERRRRLSSPDEIPVRQPREQMTHDVSSSPPRKPREQQLHRGSPD
ISEDKLIASPAKVRNKEEYSRNRLDNKDFRNKEHEMKSGKSSGRVVPESPDQQQAPTIYK
DSLRGEMQNPDEGRKSDEKNHSHSKNSKDSDRHCKSGSVHSSIEKVDHSNRSGIVDSGSE
ESEKCRGAEKGKRKNKRSERQEVTSDDDYSNDSEIDERKNAKRRRKEEKRSRKEKKRRRR
EERRRRKEERRAEKMKGKNYSDASASDGEHVGRRKLHSSDNEEKEDVQKKLEIELRKKAL
ESLKAKKGISH
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgggtttttcaggggtacgtccgctgatcaggacactaggttttccaataag
caagcgaagctgatgaaatctcagaaatttgcacctgaattggaacatttggtcgatata
acgaaggtcagtatggatgttatgcgcccgtggattgctaatcgagtaacggagcttctc
ggattcgaagatgaagttcttatcaactttatctatggtcttttggaaggaaaggtggtg
aatgggaaggaaattcaaatctcgcttactggatttatggagaaaaacactgtgaagttt
atgaaagagctttggacactgcttatcagtgcacagaacaatgctagtggtgttcctcaa
cagtttttagatgccaaacaagaagaagcacggaaaaagaaggaggaggcagacaagttt
gcaagtgacattcagagaaagaaagagaaggagaggatagatcaacaagagatattgaag
aagatggaagaaggggctgacaagaaagcaaacagtgctgcattggagccaagcacaaag
cgtatgtcgccaagggattcaaatgatcattatgaggatgaaagaggagctgaaaagagg
attggtgtgaaggcaaggagcaaggtttccagatctccaaattctgaaaattcatctttg
tctcctcgtgaaagacaccgatcaagaagtatttccaagtcaccaaaagcgttgagacga
tccatttcttctgataggagtgatcgctcttcaccaagacggcctattacaactgttcgg
aggcattcgccagagggatcaacctccccaagaggaagatcacgttattccaggcaaaga
tctagatcaaattcccaacaaagatcaccctctccgtatcggcgtagagtacgttctcca
tattggcgtagaccctcacctgtcaggcgccgcagatcaccatccccagtccgtcgccgc
agatcaccatcgccagtccggcgccgcagatcaccttcgccagtccggcgccacagatca
ccttcaccagtccggcgccgcagatcaccttcaccagtccggcgccgcagatcaccctcg
cctattcgacgtcccagatcaccctcgcctgtgcgacgtcccagatcaccctcgcctgtg
cgacgtcccagatcaccctcgcctgtgcggcgtcgcaggtcaccctctcctttgcgacgt
cgcaggtcgccctctcctttgcgacgtcgcagatctcgctcacctgtgcgtcgcagatca
ccctcacctgtacgacgggcgtatcgaagatccccattgaatacacggaacaggtatgtg
tctcccttgcaacataggtcaccagttcgtagcaggaggtcaccaactcctccgcatagg
tctccgtctccgcatgatcgaagttcatctcctattcagcatggttccccttcgccaatc
aggagaacatcaaagcttcagagatctccctcacaatctcctcaagaaagaaccaggtcc
cgtgaaaaaatttctcctgtgccacaccggtctagctcgtatgggtcattgcagagggaa
ttaaagaatgggaatgattcgcgtaaaagagcaccagatttgtcgccatcaccagtgagg
tctcgtttactctcagaatctccaccaggcgtaagaagtgatagtgaagaaaggagaaga
agattatctagcccagatgagattccagtgagacaaccaagggagcaaatgactcatgat
gttagctcaagtcctccaaggaaaccaagagaacaacaacttcatcgtggaagtccagac
ataagtgaagataagctgatagcctctcctgctaaggttcgtaacaaggaagagtactct
cgaaaccgtctggataacaaggacttcagaaacaaggagcacgagatgaagagtggcaaa
tcttctgggagggtggttcctgaaagtcctgatcaacaacaggctccaaccatatataag
gactctctacgtggtgagatgcaaaatcccgatgagggtagaaagtctgatgaaaagaac
cattctcattcaaaaaattccaaggacagtgatcggcattgcaaatctggatctgtgcac
tcatccattgaaaaggttgatcatagtaatcgaagtggtattgttgattctggttccgag
gaaagtgaaaaatgcagaggtgcggaaaagggaaaacgaaagaataagagatcagagagg
caagaagttacttcagatgatgattacagcaatgattctgaaatagatgagaggaagaat
gctaaaaggagaaggaaagaggaaaagagatcaaggaaggagaagaagcgccgaagacgc
gaggagcgacgtcgcagaaaagaagaacgtcgtgcagagaagatgaaagggaagaattac
agtgatgcttctgcttcagatggtgaacatgtaggcaggaggaagcttcattcaagtgac
aatgaagagaaggaggatgttcagaagaaacttgagattgagttacgcaagaaggctctt
gaatcacttaaagcaaaaaagggcattagtcactaa
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