Pyrus communis (pear): 137741589
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Entry
137741589 CDS
T10779
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcox03036
]
137741589
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcox00535
]
137741589
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
137741589
Meiosis-specific proteins
Cohesin complex and associated proteins
137741589
Proteoglycans [BR:
pcox00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
137741589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
ATG14
bHLH_ILI
T2SSF
Microp_apicomplexa_7
Cytochrom_C_2
Motif
Other DBs
NCBI-GeneID:
137741589
NCBI-ProteinID:
XP_068337385
LinkDB
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Position
8:complement(12374787..12390887)
Genome browser
AA seq
1204 aa
AA seq
DB search
MYIKQVIIEGFKSYREQVATEAFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNADNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKIKQIVQVVQYLDERLKELDEEKEELRQYQQFDKQRKSLEYTIYDKELQDARQKLA
EVEDARNKVSETSTKMYNTVLDAHEKSKELDKILKDLTKELQTLDKEKEAIEKRRTEAIK
KRTELQLDVNDLEEKKTGNTRAKEDAMKQLQSLQKEITDSEEELKKINPLYDNQVKMEME
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNLAQEQKLMVEI
ARLDAELSDRDVYIESRRTEIATIESLISQSHDGFNHHKTQRDKLQDERKSLWRKETELS
AEIEKLRAEVEKAEKSLDHATPGDVRRGLNSVRKICREYNIRGVFGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSLKGGRVTFIPLNRVKAPRVTYPQNSDVVPL
LKKLKFAPNYTPAFSQVFARTVVCRDLDVATRVARNDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMHIIMQNTKSINMKEEELEKVKKMLEEIDRSITELVTEQQKIDAKRAHDKS
ELEQLKQDIANANKQKNLISKACGNKKKSLADVETQITQLRASMAMKRAEMGTDLIDHLS
PDEKDLLSRLNPEIADLKEKLISCKTDRFETETRKAELETNLTTNLERRRQELEAIISSV
ETENYNGEAEIKIQELNDAELLVKDATEQLKRVSESIDSQSKQLKRIKDEKTALKTLEDK
YERTLQDEAKELEQLLSKRNVFLAKQEEYSKKIRELGPLSSDAFEAYKRRGIKDLHKALH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELKAGDQKIDELIKVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGHHDDDDQDEDGPRDADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVSDKIYAVEHKNRVSRVNVVSKDDALDFIERDQS
HNAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattattgaaggatttaagagctacagagaacaagttgctact
gaggccttcagcccaaaagttaattgtgttgttggtgccaatgggtctggaaagacgaac
ttcttccatgcgatccggtttgtcctaagtgaccttttccaaaaccttcggagcgaggat
aggcatgctctactccatgaaggtgcagggcaccaagtattatctgcgtttgtggagatt
gtctttgataacgctgacaatagaatcccggttgataaggaggaagtgcgcttgcgaaga
accattggtttgaagaaggatgagtatttcttggatggaaagcatatcacgaaaacggag
gttatgaatttactggaaagtgctgggttctctcgctccaatccttattatgttgtgcag
caaggaaagatagcatccttgacactgatgaaagactctgaacggctggatttgctgaag
gaaattggtggtactcgagtgtatgaggagaggcgccgagaaagtttgaaaattatgcag
gaaactggaaacaaaataaaacagatagttcaagttgttcagtacttggatgagagatta
aaggagttggatgaagagaaagaggaactaagacagtatcagcaatttgacaagcagcgg
aaatctttagaatacactatttatgacaaggaacttcaggatgctcgccaaaagttggca
gaggtagaagatgctagaaataaggtttctgaaacttcaacaaagatgtataatactgtg
ctggatgcccatgaaaagtctaaggaactggacaagattttgaaagatctgacaaaagag
cttcaaactttagataaggaaaaagaagcaatagaaaagcgaaggacagaagcaataaag
aagcgcacagagcttcagcttgatgtcaacgatttggaggagaagaaaactggaaatacc
cgtgccaaagaagacgctatgaaacagctgcagagtctgcagaaagaaattacggattca
gaggaagaacttaagaaaataaatcctctgtatgataatcaagtcaagatggaaatggag
ataacaaaaggaataatggaacgcgagaagcagcttagcatactgtaccaaaaacaaggc
cgtgccacccagttttcaagtaaagctgctcgtgacaaatggctccaaaaggaaattgat
gatcttgagcgagttctttcttcaaatttggcacaggagcaaaaacttatggttgaaatt
gcacggcttgatgctgagttgagcgaccgggatgtctacattgagtctcgaagaactgag
attgctactattgaatctctcatctctcagtcacatgatgggttcaatcatcacaagaca
cagagggacaagctgcaggacgaacgcaagtccctgtggaggaaagaaactgaactttct
gctgaaattgagaagctgagagcagaagttgaaaaggctgaaaagagccttgatcatgca
actccgggtgatgtgaggagagggctaaattctgttcgtaagatttgcagagagtataac
attcgtggggtatttggtcctatcattgagttgcttgattgtgacgaaaagttttttact
gccgttgaagtaactgctgggaacagcttgtttcacgttgtggttgagaatgatgaaata
tcaacccagataattaggcaccttaattcattgaaaggtggacgtgttacgtttatcccc
ctcaatagggtgaaggctccacgggtcacttatccacagaattcagatgtggttcctctg
ttaaagaaattaaaatttgctccgaactataccccggcattttcccaggtatttgcaaga
acagttgtttgtcgagaccttgatgtggctacaagggttgctcgtaatgatggtctagac
tgcattactttggaaggtgaccaagtcagcaagaaggggggtatgacgggaggattttat
gaccatagacgatcaaaattgaagtttatgcatataataatgcagaatacaaaatctatt
aacatgaaggaagaagagctggagaaagtgaagaaaatgcttgaagagatagacagaagt
attacagaactcgtaactgaacagcagaaaattgatgctaagcgggcccatgacaaatca
gaactggaacaacttaagcaggacattgctaatgctaataagcagaagaatctgatttcc
aaagcctgtgggaataagaaaaaatcactggcggatgtggagactcaaattactcagctt
agagccagtatggccatgaagagagctgaaatgggcacagatctcattgatcatttatct
ccagatgagaaggatcttctttcaagattaaaccctgaaatagcagatcttaaagagaag
cttatttcatgcaagacagatcgttttgagactgaaacaagaaaggctgagctggaaact
aatttaaccacaaaccttgagaggcggaggcaagaactagaagccataatatcttctgtg
gagactgagaattataatggtgaagcagaaattaagattcaggaacttaatgatgctgaa
ttattggttaaagatgcaacagagcagctcaaaagagtttctgaaagtatagatagccag
tcaaagcagcttaagagaattaaagatgaaaagactgcgttaaagactttggaagacaag
tatgagaggacacttcaggatgaagccaaagaattagagcaactgttgagtaaaagaaat
gtgtttcttgcaaaacaagaagaatactcaaagaaaatcagggaattgggtccattgtca
tcggatgcttttgaagcgtataagcgaaggggcatcaaagatttgcataaagcgctgcat
agatgcaatgaacaactgcaacagtttagtcatgtcaacaagaaagcacttgatcagtat
gtaaattttactgagcaacgagaagagctccagaagaggcaagctgagctgaaagcgggt
gatcagaaaattgatgaacttataaaggttttggatcaaaggaaagatgaatcaatagaa
cgtacttttaaaggtgttgctaggcacttccgagaagttttctcagaacttgtgcaaggt
ggccatgggcaccttgttatgatgaagaaaaaggatggtcaccatgatgatgatgatcag
gatgaggatggaccacgtgatgcggatttggagggaagagtcgagaaatatattggtgta
aaagtgaaggtttctttcactggacaaggggagactcaatccatgaagcagttgtctgga
ggtcagaaaactgttgttgcgctaacgcttatttttgccatccagcgatgtgatcctgcc
ccattttatctttttgatgaaatagatgcagcacttgatcctcagtacagaaccgctgtt
ggaaatatgatccgacgcctggcagacatggcaaacactcaatttataaccacaacattc
cggccagagcttgtgaaagtttctgacaagatatatgctgttgaacataaaaacagggtg
agccgtgtcaacgttgtatcaaaggatgatgcattggatttcatcgagcgcgaccagtct
cacaatgcggagtaa
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integrated database retrieval system
