Pyrus communis (pear): 137741608
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Entry
137741608 CDS
T10779
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcox03016
]
137741608
Enzymes [BR:
pcox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
137741608
Transfer RNA biogenesis [BR:
pcox03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
137741608
Prokaryotic type
137741608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
137741608
NCBI-ProteinID:
XP_068337407
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All DBs
Position
8:23925140..23928518
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AA seq
528 aa
AA seq
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MAVSSLRLPFSLCLPKFPSRTFHFSKPILPLRLNLIYCCSSSSLYTPEQTSTSSGHKWQS
VRKRKVVLRVGYVGTEYRGLQMQRDENSLSTIEKELETAIYNAGGIRESNLGNLNKIAWA
RSSRTDKGVHSLATMISLKMEIPENAWVGDPFGMDLVNHINSYLPRNIKVFSILPAQRSF
DPRKECNLRMYSYLLPAEVIGIKSHFNADEIDYHISDFNNILKAFEGEHPFHNYTIRSKY
RSKYPAKQSPKHGKVSIAGRSTREATASESESEESDREEYFDETYASESNAEELNQISSF
SSNSEDSLLDACKKQGDVLKVQSAGSVIRARWLFEPDERDRIGASHFRKIFQCSCGKLEK
SLGHDYVEVSIWGESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLAKFSRIVLPLAPSEV
LFLRGNRFSIRVKNVTRPEMTTMVESEEINKAVDEFFISVMLPQVTKFLDPSGYPWNEWV
ENLDRNTGIPDAELDEVRNAWKVWREKFDGFASVRNQRDKVDADDCNG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctcctcactgcgactccccttctccctctgcctcccaaagttcccatctcgc
accttccatttttcaaagccaattttacccctcagactcaaccttatttactgctgctcc
tcctcctccctctatacgcccgaacaaacctcaacgagctccggtcacaaatggcagtcc
gtccgaaagaggaaagtggttctccgggtcgggtacgtcggcaccgagtaccgaggcttg
caaatgcaacgagacgaaaattcattatccactattgagaaagagttggaaactgccata
tataacgcgggcggtatccgtgagagtaatctggggaaccttaacaagattgcgtgggcc
aggagtagccggactgataaaggagttcactctttagcgacgatgatatcattgaaaatg
gaaatcccagagaatgcatgggtcggagacccttttggcatggatcttgtgaatcacatt
aactcttatctgcctcgtaatatcaaagttttcagcattttgcctgcgcagaggagcttt
gatcctagaaaggagtgtaatctccgcatgtattcatacctccttcctgctgaggttatt
ggaatcaaaagtcacttcaacgcagatgaaattgattatcacatctcagacttcaataat
atactaaaagctttcgagggagaacatccttttcataattatactatacgatctaaatac
aggtcgaagtatcctgcaaaacaatcacccaaacatggaaaagtgtcgatagcaggtaga
tcaaccagagaggcaacagcctctgagtctgagtctgaggaaagtgacagggaagaatat
tttgatgaaacatatgcatcagaatcaaatgctgaggaactgaaccaaatttcttcgttt
tctagcaatagtgaggacagcttactcgatgcttgcaagaagcagggagatgttctaaag
gttcaaagtgctggttcggtcatccgtgcaagatggttatttgaacctgatgaaagagat
agaattggtgcttctcatttcagaaagatttttcagtgctcttgtgggaagctggagaaa
tcgcttggacatgattatgttgaagtttccatatggggagagtctttcatgttacatcaa
atccgcaaaatggttggaactgctgtggctataaagcgcaagttactccctagagatatt
ttgacattgtcactggccaagttttcccggatagtcctaccacttgccccatctgaagtt
ttgtttttaagagggaacaggttttcaattagagtaaaaaatgtaacaaggcctgaaatg
acgacaatggttgaatcagaagaaataaataaggcggttgacgagttcttcatatctgtt
atgttgcctcaagttacaaagttcttagatccttcaggatatccttggaatgaatgggtt
gagaatttggatagaaacacaggcattccagatgcagaattggatgaagtcaggaacgct
tggaaagtgtggagggaaaagtttgacggttttgcatcagtccgaaaccaaagagacaag
gtagatgccgatgattgcaatggataa
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