Entry |
|
Name |
(RefSeq) THO complex subunit 4A-like
|
KO |
|
Organism |
pcox Pyrus communis (pear)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pcox00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137741663
09122 Translation
03013 Nucleocytoplasmic transport
137741663
03015 mRNA surveillance pathway
137741663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pcox03019]
137741663
03041 Spliceosome [BR:pcox03041]
137741663
Messenger RNA biogenesis [BR:pcox03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137741663
TREX complex
137741663
Spliceosome [BR:pcox03041]
Complex C
Other components
EJC/TREX
137741663
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137741663
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:20642239..20644623
|
AA seq |
262 aa
MQDPLSMSLDDLIKTSKKSGSGNARGRGGRGTSGPGPARRLPNRGANRTTPYPAAAKAPE
AAWQHDMYGDLGAAAYAAPAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYG
VHYDRSGRSKGTADVVFSRRTDAAAAVKRYNNVQLDGKPMKIEIVGTNIGTPGAPPAFPP
AANGNFGNRNGPPMGGQSRGGAFGRIRGGGGGGGGRGGRGPRRGGGGRGSGRGRGEKDQK
VSAEDLDAELEKYHAAAESMQE |
NT seq |
789 nt +upstreamnt +downstreamnt
atgcaggaccctctaagcatgtccctggacgacctcatcaagaccagcaagaaatcggga
tccggtaacgcccgaggccgcggcggccgggggacctccggacccggacccgcccgccgc
ttgccgaatcgcggtgccaatcgtacgacgccgtacccggctgcggccaaggcgccggag
gctgcgtggcaacacgacatgtatggggatcttggtgcggcggcgtacgcggctccagcc
ggaagagcatcggctatcgaaaccggaaccaagctctacatctccaatctcgattatggc
gtttccaatgaggacattaaggaattgttttctgaggttggtgacctgaaacgttatgga
gtacattatgacagaagtgggagatcaaagggaactgcagatgtagttttctcacgacga
acggatgctgcggcggctgttaaaagatacaacaatgttcagcttgatgggaagccgatg
aagattgagattgtaggaacgaacattgggacacctggagccccacctgctttcccccct
gctgcaaatggaaattttggaaatcggaatggaccacccatggggggacaaagtaggggt
ggtgcatttggacgtatacgcggcggcggcggcggcggtggtgggcgtggtggccgtggt
cctagaaggggcggtggtggacgtggaagtggaaggggccgtggtgaaaaggaccaaaag
gtttctgctgaagatcttgatgccgagctagagaagtaccatgcagcagcagaatcaatg
caagagtaa |