KEGG   Pyrus communis (pear): 137741663
Entry
137741663         CDS       T10779                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03013  Nucleocytoplasmic transport
pcox03015  mRNA surveillance pathway
pcox03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137741663
  09122 Translation
   03013 Nucleocytoplasmic transport
    137741663
   03015 mRNA surveillance pathway
    137741663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcox03019]
    137741663
   03041 Spliceosome [BR:pcox03041]
    137741663
Messenger RNA biogenesis [BR:pcox03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     137741663
    TREX complex
     137741663
Spliceosome [BR:pcox03041]
 Complex C
  Other components
   EJC/TREX
    137741663
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137741663
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 137741663
NCBI-ProteinID: XP_068337462
LinkDB
Position
8:20642239..20644623
AA seq 262 aa
MQDPLSMSLDDLIKTSKKSGSGNARGRGGRGTSGPGPARRLPNRGANRTTPYPAAAKAPE
AAWQHDMYGDLGAAAYAAPAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYG
VHYDRSGRSKGTADVVFSRRTDAAAAVKRYNNVQLDGKPMKIEIVGTNIGTPGAPPAFPP
AANGNFGNRNGPPMGGQSRGGAFGRIRGGGGGGGGRGGRGPRRGGGGRGSGRGRGEKDQK
VSAEDLDAELEKYHAAAESMQE
NT seq 789 nt   +upstreamnt  +downstreamnt
atgcaggaccctctaagcatgtccctggacgacctcatcaagaccagcaagaaatcggga
tccggtaacgcccgaggccgcggcggccgggggacctccggacccggacccgcccgccgc
ttgccgaatcgcggtgccaatcgtacgacgccgtacccggctgcggccaaggcgccggag
gctgcgtggcaacacgacatgtatggggatcttggtgcggcggcgtacgcggctccagcc
ggaagagcatcggctatcgaaaccggaaccaagctctacatctccaatctcgattatggc
gtttccaatgaggacattaaggaattgttttctgaggttggtgacctgaaacgttatgga
gtacattatgacagaagtgggagatcaaagggaactgcagatgtagttttctcacgacga
acggatgctgcggcggctgttaaaagatacaacaatgttcagcttgatgggaagccgatg
aagattgagattgtaggaacgaacattgggacacctggagccccacctgctttcccccct
gctgcaaatggaaattttggaaatcggaatggaccacccatggggggacaaagtaggggt
ggtgcatttggacgtatacgcggcggcggcggcggcggtggtgggcgtggtggccgtggt
cctagaaggggcggtggtggacgtggaagtggaaggggccgtggtgaaaaggaccaaaag
gtttctgctgaagatcttgatgccgagctagagaagtaccatgcagcagcagaatcaatg
caagagtaa

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