Pyrus communis (pear): 137742448
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Entry
137742448 CDS
T10779
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137742448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137742448
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137742448
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
137742448
NCBI-ProteinID:
XP_068338415
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Position
8:complement(1167529..1171263)
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AA seq
584 aa
AA seq
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MPKMANSFPEEVLEHVFSFIQTDQDRNSISTVSKSWYEIERWCRRRIFIGNCYAVSPRMV
IRRFPDIRSIELKGKPHFADFNLVPDGWGGYVYPWIAAMASAYPWLEEIKLKRMVVTDET
LELIAKSFKNFKLLVLSSCEGFSTDGLAAIAANCRNLQELDLHESDVEDLSGHWLSHFPD
TYTSLVSLNIACLGSELSFSALERLVGRCPNLRSLRLNRSVPLDRLANLLRQAPRLTELG
TGAYSAELRPDIFTILSGAFSRCKELKSLSGFWDVVPPYLTAIYSICPGLTSLNLSYSNI
QSPDLVKLVSECPNLQRLWVLDYIEDVGLNALAESCKDLQELRVFPSDPFVVEPNVSLTE
QGLVSVSEGCPKLRSVLYFCRQMSNDALITIARNQPNFTCFRLCIIEPKIPDYLTLQPLD
VGFGAIVENCKNLRRLSISGLLTDRVFDYIGTYGKNLEMLSVAFAGDSDLGLHHILSGCD
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKLPRLNVEVIDER
GHPESRPENSPVEKLYIYRSVAGPRFDMPGFVWTMDKDSTLRIT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaatggcgaactcgtttcccgaggaggtgctggagcacgtgttctcattcata
cagacggaccaggaccggaactcgatctcgacggtgagcaagtcgtggtacgagatcgaa
cggtggtgcaggcggcggattttcatcgggaactgctacgctgtcagccctaggatggtg
atcaggcggttcccggacattagatccatcgagctcaagggaaagcctcacttcgccgac
ttcaatctggtccccgacggttggggtgggtacgtgtacccctggatcgccgccatggcc
agcgcctacccttggctcgaagagatcaagctcaagaggatggtcgtcaccgacgagacc
ttggagctgattgccaagtccttcaagaatttcaagctcctcgtgctttcgtcctgtgag
gggttcagtactgacgggctcgccgccattgctgccaattgcaggaatctgcaggagctg
gacttgcatgagagtgatgtggaggacctgagtgggcattggctcagccattttcctgat
acgtacacatcacttgtttccctcaacattgcatgtctagggtccgagttgagtttctct
gccctggagcgcctggtgggtaggtgtcccaacctgaggagtctccggctcaatcgttct
gtgcctcttgacaggctagccaatctacttcgccaggcacctagactgactgagttaggc
acaggggcgtactcggctgagttgcggcctgatatcttcacaatcctatcaggtgccttc
tcaagatgcaaggaactcaagagcctatctggattttgggatgtggtaccaccgtatctt
acagctatttattctatctgccctgggctaacatcactaaatttgagttattccaatatt
caaagcccggatcttgtaaagcttgttagcgaatgcccgaatctgcagcgcctctgggta
ttggattacattgaagacgttggccttaatgccctggcggaatcttgcaaggatctacaa
gagttaagggtgttcccttcagatccatttgtggtggaaccaaatgtttccttgacagag
cagggcctcgtatctgtctctgagggctgtccaaagctccgctcagttctgtacttctgc
cggcaaatgtccaatgatgcattaatcaccattgctaggaatcagccgaactttacatgt
tttcgtctttgtataattgagcccaaaattcctgactacctgacccttcagcctcttgat
gtgggttttggggccattgttgagaactgcaagaatctccggcgattgtccatctctggt
ctactaactgatcgagtgtttgattatatcggaacctatggtaaaaatttggagatgctg
tctgtagcctttgccggagatagtgacttggggcttcatcatatattgtctgggtgtgat
aatcttcgtaagctggagatcagggactgtccgtttggtgacaaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcagtgagttatgga
gcatgtaagctgctaggccagaagttaccgaggcttaatgtggaagtcattgatgagagg
ggacacccagaatccaggccggagaactctcccgttgagaagctctacatctataggtcg
gttgcagggcctaggtttgacatgcctggctttgtatggaccatggataaagattcgacg
ttgaggattacctga
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