Pyrus communis (pear): 137742646
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Entry
137742646 CDS
T10779
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137742646
04121 Ubiquitin system [BR:
pcox04121
]
137742646
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137742646
Membrane trafficking [BR:
pcox04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137742646
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137742646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
zf-RING_16
Zn_ribbon_FGT1_2
Prok-RING_4
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
137742646
NCBI-ProteinID:
XP_068338667
LinkDB
All DBs
Position
8:complement(21695326..21696843)
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AA seq
370 aa
AA seq
DB search
MAMPSPPPTTSYWCYRCTRFVRVFALDSALSCPHCETGFLEEIETMPQPLPQPLPPPNYL
RRRFPSSHRHDDEPGQNPTPASRRVRRASGERSSPFNPVIVLRGTEANTDSNSFELYYDD
ATGSGLRPLPPTMSEFLMGSGFDRLLDQLSQIEITGLGRPENPPASKSAVESMPVIQIAE
THVVSDSHCAVCKEAFELGSEAREMPCKHIYHPDCILPWLSMRNSCPVCRHELPADQNNR
NSDPGLEEEAMGLTIWRLPGGGFAVGRFSGGRRPGDRELPVVYTEMDGGFNGNGAPRRVL
WASRSRGSERVGIRRAFRNIASFWGRLRSNSSSSRSGSESEPGSGLTRSQSSSVFGRFVN
RRGRAWVLDD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggccatgccatcgccgccgccgacgacgtcgtattggtgctacagatgcactcgcttc
gtccgagtgtttgccctggactccgccctctcgtgcccccactgcgaaaccggcttcctt
gaggagatcgagacgatgccccagccgctgccgcagccgctaccaccgccgaactatctc
cgccgtagattcccgtcatcccaccgccacgatgatgaaccgggtcaaaacccgactccg
gcctctcgccgggtccgacgagcatccggcgaacggtcgtcaccttttaacccggtcatc
gttctacgtggcactgaagccaataccgattccaactcattcgaactatactacgacgac
gccaccgggtcggggctccgtcccctcccgcccaccatgtccgagtttttaatgggctcg
ggattcgaccgtttactcgaccagctttcccagatcgaaatcaccggtttgggccgaccc
gaaaacccgcccgcgtctaaatccgccgtggaatctatgcccgttattcaaatcgctgaa
actcacgtcgtttcggattcgcactgcgccgtctgcaaagaagcattcgaactagggtcg
gaggcccgggaaatgccgtgcaagcacatataccacccggattgcatcctcccctggctc
tcgatgcgaaactcctgcccggtatgccggcacgagctgcccgctgaccaaaacaatcgt
aattcggatccgggtctcgaggaagaggccatggggttgacaatctggagattacccggc
ggcggtttcgccgtggggaggttctcaggcggcagaagacccggcgacagggaattaccg
gttgtgtacacggaaatggacggcgggttcaatggaaacggggctccgagaagggtacta
tgggcatcgaggagtagagggagcgaaagggttgggattcggagggcttttcgtaatata
gcttcgttctgggggcgattacgttccaattcatcgtcttcgaggtccggttcggaatct
gaacccgggtcgggtttgactagaagtcagtcaagttcggtgtttgggcggttcgtaaac
cggcgtggcagggcgtgggtgttggatgattag
DBGET
integrated database retrieval system
