Pyrus communis (pear): 137743058
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Entry
137743058 CDS
T10779
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137743058
04121 Ubiquitin system [BR:
pcox04121
]
137743058
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137743058
Membrane trafficking [BR:
pcox04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137743058
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137743058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
HypA
zf-HC5HC2H
zf-RING_5
zf-RING_10
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-GeneID:
137743058
NCBI-ProteinID:
XP_068339077
LinkDB
All DBs
Position
8:complement(27480755..27483053)
Genome browser
AA seq
379 aa
AA seq
DB search
MEDAIAARYWCHMCSQMVNPIMEIEMKCPFCQSGFIEEMNGTTRDNQEADSDFGSDRALS
LWAPILLGMMNNPRRRRRLRRLDFDEDDDDDNDNDEGETRQGRDTELDRELESIIRRRRR
SSASFLQLLQGIRAGLASESENSEGDRDRDRGRERERERERVILINPFNQTIIVQGSYDS
NQGQINNHTPISSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPAVTIKENM
QCSVCLDDFEVGVEAKEMPCKHKFHSGCILPWLDLHSSCPVCRFQLPTDESKRDSDISRT
SSNSRESEEIGDVGGGGGGEEGDGDGDGRNGNGRRFSIPWPFSSLFSHSGSQSGGSGGNS
SSAAANATGSGSASQTEEN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcaattgcagcaaggtattggtgccacatgtgttctcaaatggtgaatccc
atcatggaaatagaaatgaaatgccccttttgccaaagcggatttattgaggaaatgaat
ggcactacgagggataatcaagaggctgactctgattttggatccgatcgagcactctcc
ctctgggctccgatcttgcttggcatgatgaacaatccccgtcgtcgtagaagattaaga
cgactagactttgatgaagatgatgatgatgacaatgacaatgatgaaggtgagactcgc
cagggcagagacactgaattggacagagaacttgaatcaatcatccgaaggaggaggaga
agctcagcttcttttctacagctgcttcaaggcattcgagctggcttggcatctgaatct
gagaattctgagggtgatagggatagggatagagggagagaaagagaacgggagagggag
cgtgtaattcttatcaatcctttcaatcaaaccatcattgttcagggatcttacgattcg
aatcagggtcaaatcaacaatcacacccctatcagttcattaggcgattatttcattggg
cctggtttggatttgttgctgcaacatttggcagagaatgatcctaataggtatgggact
ccgccagcacaaaaggaggcagtggaagcgctgcccgctgtgacaatcaaggagaatatg
cagtgttcagtgtgcttggatgattttgaggttggtgtagaagccaaagagatgccatgt
aagcataagtttcatagcgggtgtattctgccatggttggaccttcatagttcctgtccg
gtttgcaggttccagttgcctactgatgaatcaaagcgtgattcagatatttccaggacc
agcagtaactcgagggagagtgaagagattggcgatgttggtggtggtggtggtggggaa
gagggagatggggatggggatgggagaaatggaaacgggagaaggttttcaattccgtgg
cctttcagtagtctgttttctcactcaggatctcagtcgggtggcagtgggggaaattca
tcgtcagcagcagcgaatgcaactggaagtggaagtgcttctcaaacagaagagaattga
DBGET
integrated database retrieval system
