Pyrus communis (pear): 137743213
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Entry
137743213 CDS
T10779
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137743213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137743213
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137743213
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137743213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
137743213
NCBI-ProteinID:
XP_068339197
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All DBs
Position
8:complement(24945236..24946081)
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AA seq
281 aa
AA seq
DB search
MKKVEIRHVWQHNLESEFALMQSMIRYYPFLSIDTEFPGTVFQYSDIHTPLPTPASKYKL
MKANVDNTNIIQLGLTLSDNNGNLPSFGNNSCYIWEFNFRDFDVHRDLQNISSIQLLEKQ
GIDFLKNKEKGIRSSDFSLLWHKSSLLSKKSQLTWVGFHSAYDFGYLIKMLTDDWLPPDI
NSFMCMMDIYFGKKVYDIKSMIRVSRGIYGGLERVANKLGVDRVAGKSHQAASDSLLTWQ
TFQKLTHVYYTSMLGEDNFSLDLRDLDWSQRVLYGLEVEAH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagttgagattcgacatgtatggcagcacaatttggaatccgagtttgctcta
atgcagtccatgattcgttactaccctttcctctccatagacaccgaattccctggcaca
gttttccagtattccgatatccacacccccttaccaaccccggcgtccaaatacaagctc
atgaaggccaacgtggacaacaccaacataatccagttaggtttaacactctccgataac
aacggaaacttgcccagtttcggcaataatagctgctacatatgggagttcaacttcagg
gacttcgatgtccatcgtgaccttcagaatataagttctattcagttacttgagaagcaa
ggaatcgatttcttgaaaaacaaggaaaagggtattcgttcttccgacttctccttgctg
tggcataaatcctcgctgctctccaagaagtcccagttgacatgggtgggtttccatagc
gcttacgatttcgggtacctgatcaagatgctgacggacgactggttgccgccggacatt
aacagtttcatgtgcatgatggatatatactttgggaaaaaagtgtacgacatcaaaagc
atgattagggtttctcgagggatttatggaggattagagagagtggctaacaagcttggg
gttgatcgtgtggctgggaagagtcatcaggctgcttctgatagtttgctgacttggcaa
acgtttcagaagcttacacatgtgtactacacaagtatgctaggggaagacaacttcagt
ttagatttgagagatttagattggtcccaaagggttttgtatggtttggaagttgaggct
cattga
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