Pyrus communis (pear): 137743283
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Entry
137743283 CDS
T10779
Name
(RefSeq) uncharacterized protein
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
pcox03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137743283
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137743283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137743283
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137743283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
137743283
NCBI-ProteinID:
XP_068339251
LinkDB
All DBs
Position
8:complement(10365369..10369845)
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AA seq
713 aa
AA seq
DB search
MDEGDGVDQMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFYQSMRKNEDLGF
RNEVVEEKKVEVESPDVAPSESQGGPIPGVGGGNGEGTGGDGGDGGVRGSGYNNQNLGFR
GNEMGAKGSGGLGPVGGSGGGGIRVELGQSSNKVNEFEQQSGNNSGVGVQGIVSQQLAPQ
LQQHHQPQPPPQQQQLHGAAVVGNMGNEGMLRQAGGVGSGNMNGIGGNSGPGGGFGGAAG
GGAGTILFVGDLHWWTTDAELEAELCKYGPVKEVKFFDEKASGKSKGYCQVEFFNPNSAT
ACKEGMHGHVFNGRPCVVAFASPFSVKRMGEAQVNRNQQVAQTAVPQTGGRRGPNEAGNK
TGGSNIATGGNYQGGESNRGYGRGNWGRGNSQGMGNRGPVGPRNRGVIGRGIMSNGGNGF
GQGIGATPPMMHPQSMMGQGFDPAFGAPMGRMGNYGGFPGAPTPPFSGILSSFPPGGVGL
PGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPNMGGWAGEEHGGGRVGESSY
GEEAASDHQYGEVSHDRGGAWPNAMKEKDRGSERDWSGSSDRRYRDDRDQGYERDVPREK
EVAHDHDLSERRYRDDVDVSRERDRNRDRGRERSRDRDRDRDRERERDRDRYREDRDRYA
DHHKYRDREQDHDDEWEQGRSSRHSKARVSQEDDRRSRSRDADYGKRRRLTSE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggcgacggggtcgatcagatggatcagtttcaccgcaacgaggcgatctcg
gcggtggctgacgatggatttttggccgaggaggacgatgattatgaggacctttacaac
gacgtcaatgtcggcgaggggttttatcagtctatgagaaagaacgaggatttagggttt
aggaatgaggtggtggaggagaagaaggttgaggttgagtcacccgatgttgcgccgtcg
gaatctcaaggtggtccgataccgggtgttgggggcggtaacggcgaggggactggtggg
gatgggggtgatggaggggttaggggttctgggtataataatcagaatctagggtttaga
gggaacgagatgggtgcgaaggggagtggtgggttggggcccgttgggggcagcggagga
ggtgggattagggttgaattagggcaatcatcaaataaggtgaatgagtttgagcaacaa
agtgggaataatagtggtgttggggttcaagggattgtttctcagcagctggcgccccaa
ttgcaacaacaccaccaaccacaacctccgccacaacagcaacaattacatggtgctgct
gttgttgggaatatggggaatgagggcatgttgagacaagctggtggtgttggaagtggt
aatatgaatgggattggtgggaatagtggtccggggggaggatttggtggtgccgctggt
ggtggagctgggacaatattgtttgtgggtgatttgcattggtggactacggatgcagag
ctggaggcagagttgtgtaagtatggacctgtgaaggaagtgaagtttttcgacgagaaa
gcaagtgggaagtcaaaagggtactgtcaagttgagttttttaatcctaattctgccacg
gcctgcaaggaagggatgcacgggcatgtgtttaatgggcggccatgcgttgttgcgttc
gcatcaccattcagtgttaagagaatgggggaggctcaagtaaataggaaccagcaggtt
gcccaaactgcagtacctcaaactggtgggaggagggggcccaacgaagccgggaataaa
actggtgggagtaacattgcgactggtgggaattatcaaggcggggagagtaatagaggt
tatgggagaggtaactgggggagaggtaattctcagggtatgggaaatagaggaccagtt
ggtccaaggaataggggtgtgattggaaggggtataatgagtaatggtggaaatgggttt
gggcaaggtattggtgcaacccctcctatgatgcaccctcagtcaatgatgggtcagggt
tttgatcctgcttttggtgctccaatggggagaatgggaaattatggaggctttcctggt
gctcctacgcctcctttctcaggaattttgtcttcatttccacctgggggtgttgggcta
cctggagtagcccctcatgtgaatcctgcattttttggaagaggaatgcccatgaatgga
atgggaatgatgcccacatcaggtgttgatgggcctaatatggggatgtggtccgatcct
aatatgggtggatgggctggtgaagagcatggtggtggcagagttggggagtctagttat
ggtgaggaagctgcttctgaccatcaatatggtgaggttagtcatgatagaggaggtgca
tggccaaatgccatgaaggagaaagatagaggttcagagagggactggtctggatcttct
gatagaaggtatcgggatgatagagatcagggatatgagagagatgtgcctagagagaaa
gaggtggctcatgaccatgacttatctgaaagaaggtatcgtgatgatgttgatgttagt
cgagaacgggacagaaatcgtgataggggccgagaacgttctcgagatcgtgatcgtgac
agagatcgtgaacgagaacgggaccgtgacaggtacagggaagacagagacagatacgct
gatcatcataagtatagagaccgtgaacaggaccatgatgatgaatgggagcagggacgg
tcatcgaggcacagtaaggcacgtgtatctcaagaagatgaccgtcggtcaagatcaagg
gatgctgactatgggaagagaaggcggcttacttccgagtaa
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