Pyrus communis (pear): 137743299
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Entry
137743299 CDS
T10779
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
pcox03015
mRNA surveillance pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137743299
09122 Translation
03013 Nucleocytoplasmic transport
137743299
03015 mRNA surveillance pathway
137743299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137743299
03041 Spliceosome [BR:
pcox03041
]
137743299
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137743299
Spliceosome [BR:
pcox03041
]
Complex C
Other components
EJC/TREX
137743299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
137743299
NCBI-ProteinID:
XP_068339265
LinkDB
All DBs
Position
8:11496889..11508512
Genome browser
AA seq
202 aa
AA seq
DB search
MASGDVETVDFEPEDDDLMDEDGAVDAEPSASPRAPLPKLKSAITGVGAASAVPKKTKGR
GFREDLNADRNSRLAASDFDSLNSSDGLEPQRSVEGWIILVTGVHEEAQEDHLQDAFGEF
GEIKNLHLNLDRRTGFVKGYALIEYESFKEAKTAIDKMNGETLLTQVLTVDWAFSNGSFL
DGSRKNSRPLRERRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagacgtagaaacggtggacttcgagcccgaagatgacgacctcatggac
gaggacggagccgtcgacgccgagccctccgcctcccccagggccccactccccaagctc
aagtccgctatcaccggcgttggagcggcgtccgccgtccctaagaagaccaaaggtcgc
ggattccgtgaagatctcaatgccgaccgtaacagccgcctcgctgcctccgacttcgac
tctctcaactcttctgacggcctcgaaccccaacgatccgttgagggatggattattctg
gtcactggggtacatgaggaggcccaagaggaccacctacaagatgcatttggtgaattt
ggggagataaagaatttgcatttaaatcttgatcgccgcactgggtttgtgaagggatat
gcactgattgaatatgaaagttttaaagaggcaaaaactgcgatcgacaaaatgaatgga
gagacattacttacacaagttttaactgttgattgggccttcagcaatggatccttcctt
gatggatccaggaagaactcaagaccactaagagaacgtcgctcaaggagtcctaggagg
agatactaa
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