Pyrus communis (pear): 137743610
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Entry
137743610 CDS
T10779
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03440
Homologous recombination
pcox03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137743610
03460 Fanconi anemia pathway
137743610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcox03032
]
137743610
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137743610
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
137743610
DNA replication proteins [BR:
pcox03032
]
Eukaryotic type
DNA Topoisomerases
137743610
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
137743610
FA (Fanconi anemia) pathway
137743610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
137743610
NCBI-ProteinID:
XP_068339640
LinkDB
All DBs
Position
1:8396623..8416184
Genome browser
AA seq
972 aa
AA seq
DB search
MSGSGGSIRVLNVAEKPSVAKSVATLLSGNQGQGLRVREGRSRYNKIFEFNYSINGRPCH
MLVTSVTGHLMELEFEDRFRKWHACDPALLFTAPVHKKVPEDKLDIKRTLEEEARRCQWL
VLWLDCDREGENIAFEVIEVCTAVNRHLTIRRARFSALTERDIYNAVQNLVNANKFFADA
VDARQEIDLRIGASFTRFQTMLLRDAFVIDSTASDRNLVLSYGPCQFPTLGFVVERYWEI
QSHEPEEFWTINCSHKSDEGTATFHWMRGHLFDYACAVVIYEMCVEEPTATVTKVRQQEK
LKKPPNPLNTIQLEQRASIYFRMSSEHTMKVAEELYQAGFISYPRTETDGFSERTDLHVI
VEEQQRHPGWGSYAQRLLDPASGLWKNPSNGGHDDKAHPPIHPTKFSSGESGWSQDHHRL
YELVVRHFLACVSQPAVGAETTVEIDIAGELFSASGRVILAKNYLDVYRFESWGGSLLPT
YEFGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATK
DSSMRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGAKSKAEVLETCLQQM
KACFLDARLNKVKLFEAMSVFFERSSRPSGDDQHTSGEFVRQCGLCHEADMVLRQNRDGN
FMVGCLGYPQCRNAVWLPGSVSEAAVTTNVCNSCTPGPVYLIQFTFRRLEIPPNYSANHL
GCIGGCDETLRQLTEICGTGSRLSARGRGPATSNNNVPRSNTRQGPCIYCHQAGHSSGDC
PSQSSGPRSVRPQSMNVQSARGRGPAMSNNVQRRNIRQGACIYCHQMGHSSGDCPSQSSG
PQSARPRSMNVQSGQVSTSCSTCGAPCALRTANTTANRGRKFYSCQSQACNFFVWEDSLN
NDNGGRGFQRANVSASASNPTRSGGSGRGGRGAGDAAGVSFVSATGDPVSGRRCFACGDP
SHFANVCPNRGN
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggagtgggggtagtattagggtgctgaacgtggcggagaagccgtcggtggcc
aagtcggtggcgacattactgtcagggaaccaagggcaagggctgagagtgagggaaggc
cgatcccgctacaacaaaatcttcgagttcaactactccatcaatggccgcccctgccac
atgctcgtcacctccgtcaccggccacctcatggagctcgaatttgaggaccgctttcga
aaatggcacgcctgcgaccccgcccttctctttaccgctcccgtccataaaaaagtccct
gaggacaagttggatatcaagaggacgttagaggaggaagcaaggaggtgccagtggctt
gtcttgtggctcgattgtgatagagaaggagaaaacattgcgtttgaagtcatagaagta
tgcacagccgtgaatcgtcatcttaccataaggagggctcgtttctcagctttgactgaa
agggatatctataatgcggtgcagaatcttgtcaacgcaaacaaattctttgctgatgca
gtggatgctaggcaagaaatagatcttcggattggtgcttcgtttactaggtttcagact
atgctgctgagagatgcatttgttattgattccactgcaagtgacagaaatcttgttcta
agttatggtccttgccagttccctacacttggatttgttgtggagagatattgggaaata
cagtcgcacgagccagaggagttttggaccataaactgttcacacaaatcagatgaaggc
actgctacattccattggatgcgtgggcatttatttgactatgcttgtgctgttgttatt
tatgaaatgtgtgttgaggaacctactgctactgtgacaaaggttagacaacaggagaag
ctgaaaaagcctccaaatcctctgaatacaattcagcttgaacagcgtgcctcaatatac
tttcggatgagttctgaacacacaatgaaggtggcagaagagctgtaccaagctggtttc
atcagttatcctcgtacggagactgatggcttctctgaaaggacggatttacatgtgatt
gtggaagaacaacaaaggcatcctggatggggatcatatgctcaacgattgttggaccca
gcatctgggctttggaaaaaccctagcaatggtggacatgatgacaaggcccatccacct
atccaccccactaaattttcttctggagaatcaggatggagtcaagatcaccatagattg
tatgagctggttgttcgccatttcctggcatgtgtctcacagccagctgtaggggcagaa
actactgttgagattgatattgctggtgaattgttctctgcttcagggagagttatacta
gcaaaaaattacttagacgtttatcgatttgaatcatggggaggttcgttgctaccaaca
tatgaatttggacaacagtttgtcccaacaacattaactcttgattcaggagtcactagg
cctccaccacttttaagtgaagctgatttgctgagctgtatggacaaggagggcattggc
acagatgcaacgatgcatgatcacataaaaaagctgctggatcgattttatgcaaccaag
gactcaagcatgcgtttctcaccgaccaatcttggcgaagcgttggtgatgggatatgat
gacatggggtataaactgtggaaaccataccttagagctgttatggagcgtgacatgaaa
gctgttagtgaaggtgctaagagcaaagctgaagttttggaaacttgcttgcagcaaatg
aaagcttgcttcctagatgcaaggttgaacaaagtaaaactctttgaagccatgtcagta
ttctttgagagatctagcaggcctagtggggatgatcagcacacatctggagagttcgtt
cggcaatgtgggctgtgccacgaagcagatatggtacttagacaaaaccgggatggaaat
ttcatggttggatgcttgggttatcctcagtgtaggaatgctgtctggctccctggatcg
gtatcagaagcagctgtaacaactaacgtttgcaactcatgcactccaggtcctgtttac
ttgattcaatttacatttcggcggctagaaataccaccaaactatagtgccaaccatttg
ggttgcattggcggctgtgatgagactcttagacagttgacagaaatctgtggaactggt
tctcggttgtcagcaagagggcgtgggccagcgacgtccaacaataatgtcccacgaagt
aataccaggcagggtccttgcatatattgtcatcaagcagggcattcttcaggcgattgc
ccttcccaatcttcaggtcctcgaagtgtgaggcctcaatctatgaatgttcaaagtgca
agagggcgtggaccggcaatgtccaacaatgtccaacgaaggaatattaggcagggtgct
tgcatatactgtcatcaaatgggtcattcttcaggcgattgcccttcccaatcttcaggt
cctcaaagtgcaaggcctcgatctatgaatgtacaaagtggacaagtatcgacctcatgt
tctacatgtggtgccccatgtgctttacgaacagctaatacaacagctaacagaggaaga
aaattctactcttgtcaatcgcaggcgtgcaacttttttgtatgggaggatagccttaac
aatgataatggaggaagaggttttcagcgtgcaaatgttagtgcctcagcatctaacccg
actcggagtggtggcagcggtagaggtggccggggtgcaggagatgctgctggtgtgagt
tttgtatcagcgactggtgatcccgtctctggaagaaggtgttttgcttgcggagatcca
tcacacttcgcaaatgtttgcccgaaccgtggtaactga
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