Pyrus communis (pear): 137744107 Help Entry 137744107         CDS       T10779                                  Name (RefSeq) uncharacterized protein   KO K06100   symplekin Organism pcox  Pyrus communis (pear) Pathway pcox03015   mRNA surveillance pathway Brite Transcription machinery [BR:pcox03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      137744107 Messenger RNA biogenesis [BR:pcox03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      137744107     U7-dependent histone pre-mRNA processing factors      137744107 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_EZ HEAT_2 HEAT Adaptin_N Hid1 Motif Other DBs NCBI-GeneID:  137744107 NCBI-ProteinID:  XP_068340076 LinkDB All DBs Position 9:complement(6308903..6320821) Genome browser AA seq 1425 aa AA seqDB search MVGMMMTANSHERLAGLMDSAIFAADIPSKLDRLRQSKQDLVRQQDPDLLSELLPRFFEL LSDRFSPVRKFATEMLGEIGFMHVELLPDIVPSLIDVLSDETPAVARQAITSGSNLFRCV LEKVSIQGLHASELDSSLESAWACVLKLKDEIYSIAFRPGSGGVRLRALKFVESVILLYT PDPNGSPGPPAHEGDLVEFNVSWLRGGHPLLNVGDLSIEASKSLGLLLDQLRFPTVKSLG NLVIVVLINSLSAIAKKRPAFYGRILPVLLGFDPSSTVINGVHVSGPRHALKNAFLTCLK CTHQGAAPWRDRLVGALRKMQAGGLVELATQQECKINGSVEDGLDDSLVTKEEKPTITIS NAVQSSFGKKRLGALDSSDIAVDQDVSGKRAKSTSSFSGDSAKEVGRNVSASQDDVSSSG TTTSRGDGDSGPVQQLVAMFGALVAQGEKAVGSLEILISSISADLLAEVVMANMCNLPPN LLGDEGDESLMNMHIVGGDSRVKYPPSFIADVLSLTSTFPPIAALLDAHQSVSNDIVKSE QEEEQVPDVVDSGVASTGMDYVFGDEPAILPMGLPASSEMEHGCPSLPSDHDMEYLESEI PGLDSACNSGSEPIIASSSTLEDASQEQVTSVKVENASQEQVTSMGQRTPLNILPSLSTD KSEELSPRTAVADVSLLSSTATSVGLSSHLVLPKMSAPVVILSDEEKDQLQQLAFTRIIE AYKQIAVAGGSQIRCSLLISLGVEFPLELDPWKLLQKHILADYTNNEGHELTLRVLYRLF GEAEEERDFFSSTTATSVYEMFLSTAVDTLRDSFPPSDKSLSRLLGEVPYLPDSVLKFLE CMCSPGNCDKTEKETQGGDRVTQGLSIVWSLILLRPPLRDPCLKIALQSAVHHLEEVRMK AIRLVANKLYPLSFIAQRIEDFAIEKLLSLKSCDATEKIDAEGSKNELQKDSDSGKHSNE PPSVSVNSKDISSDNHQSCSSQNVSSLSIAEAQRCLSLYFALCTKKHSLFRQIFVVYGSA SKAVKQAVQRQIPILVRTMGSSPNLLEIISDPPTGSENLLMQVLHTLTDGTVPSQELIFT VRKLYDSKLKDIEILIPILPFLPKDEVLLIFPQLMNLQLDKFQAALARILQGSSQSGPPL APAEILIAIHGIDPDRDGIPLKKVTDACNACFEQRQIFTQQVLAKVLNQLVEQIPLPLLF MRTVLQAIGAFPALVDFIMEILSRLVSKQIWKYPKLWVGFLKCTFLTKPQSFAVLLQLPP AQLENALKRTAALKGPLVAHASQPDIRSSLPRSILVVLGIVSDSPAQTSQSQAVAQTSQS QATAQTSQSQAAAQTSQSQAAAQTSQSQAAAHTSQSQAEAHTSQSQAEAYTSQSQAEAQT SQSKPEAQTGQSQAEAQSSQSQAGDASNSENDAVTEKPKESSSAS NT seq 4278 nt NT seq  +upstreamnt  +downstreamnt atggtggggatgatgatgaccgccaattcccacgaaaggcttgcgggtctcatggactcc gccatcttcgccgccgatattccgtcgaagctcgaccgcttgcgccaatcgaagcaggat ttggtccggcaacaggaccctgatttgctttccgaactcctccctcgctttttcgagctt ctgtccgaccggttcagcccggtccgcaaatttgccaccgaaatgcttggcgaaattgga ttcatgcacgtagaattgttgccagacattgtaccctcgttaattgatgttttgagtgat gaaacaccggcagttgctcgacaggcgatcactagcgggagtaatttatttcgttgcgtt ctcgaaaaggtttcgattcagggtctacatgctagtgaattggacagttcgcttgagtca gcttgggcatgtgtgttaaagctgaaggatgaaatatattctatagcttttcggccggga agtgggggagtaaggttgcgagcactgaaatttgttgagtcagtcattcttctttatact cctgatcctaatggctccccgggcccccctgctcatgaaggggacttagtggaatttaat gtatcttggcttcgtggtggtcatcctctgctcaatgttggagatttgtcaattgaggct agtaaaagtttgggtttattgcttgatcaacttaggttcccaaccgtgaaatcgcttggt aacttagtgatcgttgtgcttattaacagtctttcagcaattgcaaagaagaggcctgca ttctatggtcgcattttgccggtattacttggatttgatccttcaagcactgtcattaat ggggtacatgtttctgggccacgtcatgccttaaaaaatgccttcctcacctgcttaaaa tgtacacaccagggtgctgcaccgtggcgggatcgtttggttggtgcgttgagaaagatg caagctggagggttggtagagctagccacccagcaagaatgcaagattaatggaagtgtg gaagacgggctagatgattctctagttactaaggaagagaagcccactattacaatatct aatgctgtgcaaagtagttttgggaagaaacggttaggagcacttgatagtagtgatatt gcagtggatcaagatgtatcaggaaagcgtgccaaatcgacatctagtttctctggggat tcggctaaagaggtaggaaggaatgtttctgcgtctcaagatgatgtttcttcaagtgga actaccacttctagaggagacggtgatagtggacctgtgcagcaacttgttgctatgttt ggcgcattggttgctcaaggtgaaaaagctgttggttctttggaaattcttatctcaagt atctctgctgacttgctagcagaagtagtgatggctaatatgtgcaaccttccacccaat cttcttggagatgaaggagatgaatctctgatgaacatgcatatagtcggcggtgattct cgagttaaatatccaccatcatttattgctgatgttctttcacttacaagtactttccct cctatagctgcactcctagatgctcatcagtcagtgtccaatgatatagtgaaatccgaa caggaggaagaacaggtaccagatgtagttgatagcggtgttgcatctaccggcatggat tatgtttttggagatgaacctgccatcttacctatgggtttaccagcttcatctgaaatg gagcatggttgcccatcacttccatctgatcatgatatggaatatcttgagagtgaaata cctggactggattctgcttgtaatagtggatcagaacccatcattgcatcctcatcaacc ttagaagatgcaagccaagagcaagttaccagtgttaaggtagaaaatgcaagccaagag caagttaccagtatgggtcaaaggactccacttaatatacttccatcactatcaacggat aagtctgaggagcttagtccacgaacagctgttgcagatgtcagcctgctttcgtcgaca gcaacttcagttgggttgtcctctcatcttgtcctgcccaagatgtcggcaccggttgtt atcctttctgatgaagagaaggatcagttgcagcagttggcttttactcgcatcatcgag gcatataagcaaatagccgttgcaggaggttcccaaatacgatgttctctccttataagt ttaggagttgagttccctttggagttagacccatggaaactgctgcagaagcatatcttg gcagattatacgaataatgagggacacgagttgacattgcgtgtcctatacaggttattt ggagaggcagaagaggaacgcgatttcttttcttcgacaaccgctacttctgtatatgaa atgttcctttcaactgcggtggatacacttagagattcttttccaccatcggacaaatca ttaagcagattgcttggtgaggttccttatttaccagattcagttttgaaattcttggag tgcatgtgctcacctggaaactgcgacaaaactgagaaggaaacacaaggtggggatcga gtgactcaaggtcttagcattgtctggagcctgattttgctaaggcctcctctccgagat ccatgcttaaaaattgctttacagagtgcagtccatcatctggaggaagtgcgcatgaag gctatacgtctggttgcaaacaagctttatcctttgtcatttattgcccaacggatagaa gatttcgctattgaaaagttgctttctctaaaaagttgtgatgcaactgaaaagatagat gctgaaggatcgaaaaatgaattacagaaggattctgattcaggaaaacattccaatgaa cctccatcagtgagtgttaacagtaaagatatctcctctgataatcatcagtcatgcagt tctcaaaatgtgtcatccctctcaattgctgaggcccagcggtgtttgtcattgtatttt gctctttgtacaaagaagcattccctttttcgccaaatatttgttgtttacggaagcgca tcaaaggccgtcaagcaggcggttcaacgccaaattccaatacttgtacgtactatggga tcatcaccaaatcttcttgaaattatttctgatcctccaactggaagcgagaacctcctg atgcaggttttacataccctgacggatggaacagttccctctcaagaactgatttttacc gtcagaaagctatatgattcaaaactgaaggatatagagattcttattccaattttaccc tttctgccgaaagatgaggttttgcttatatttccccaacttatgaatcttcaactggat aagttccaagcagcactagctcgcatactacagggatcatcccagtctggtcctcctctg gctccagctgaaatcttgattgctatccacggaattgatcccgacagagatggaattcca ctaaagaaggtcacagatgcatgcaatgcctgctttgagcagaggcagatattcacccaa caagttcttgccaaagttttgaatcagttggttgagcagattcctcttcctttactgttc atgcgtacggtattacaagccataggtgcctttcctgcactggtggattttataatggag atcctgtctcggcttgtgagcaagcagatatggaaatacccgaagttgtgggtgggattc ttaaagtgtacgttcttgacaaaacctcagtcatttgccgtgctgcttcagctacctcca gcacagctagaaaacgcactgaagagaactgcggctctgaaaggaccgttggttgctcat gctagtcaaccggacatccgatcttcccttccaaggtcgatattggtagttttgggaatt gtttcagattctccggcacaaacaagtcagtctcaagccgtggcacaaacaagtcagtct caagccacggcacaaacaagtcagtctcaagctgcggcacagacaagtcagtctcaagct gcggcacagacaagtcagtctcaggccgcggcacatacaagtcagtctcaggccgaggca catacaagtcagtctcaggccgaggcatatacaagtcagtctcaggccgaggcacagaca agtcagtctaagcctgaggcacagacaggtcagtctcaggccgaggcacagtcaagtcag tcccaggctggggatgcaagcaactcggaaaacgacgcagtcacagagaaaccaaaggaa tcatctagtgctagttga

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