Pyrus communis (pear): 137744109
Help
Entry
137744109 CDS
T10779
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00750
Vitamin B6 metabolism
pcox01100
Metabolic pathways
pcox01240
Biosynthesis of cofactors
Module
pcox_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
137744109
Enzymes [BR:
pcox01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
137744109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
137744109
NCBI-ProteinID:
XP_068340078
LinkDB
All DBs
Position
9:complement(6323852..6325035)
Genome browser
AA seq
309 aa
AA seq
DB search
MAGSGVVAVYGNGAIAESKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES
EVLTLADEEHHINKHNFRVPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIIEAVRHV
RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYRDPDVLAEVSCGLGEAMVGLNLKDAK
VERFANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttcaggagtggtggcggtgtatggaaacggcgctatcgccgagagtaagcag
tcgcctttctccgtcaaagtgggtctcgcccaaatgctccgcggcggtgtgattatggac
gtcgtcaacgccgagcaggcccgggtcgcggaggaggccggcgcatgcgccgtcatggcc
ctggagcgtgttcccgccgacatccgcgcccaaggcggcgtcgcccggatgtccgacccg
caactcatcaaagaaatcaagcaggccgtgacaatccccgtcatggctaaggcccgaatc
gggcacttcgtcgaggcccaaatcctcgaagccatcggcgtcgattacgtcgacgagagc
gaggttctgaccctcgccgacgaggagcaccacatcaacaagcacaatttccgggtgccc
ttcgtctgcggctgccggaacctcggcgaggccctccgccgtgtccgggagggcgcggcg
atgatccggacgaaaggcgaggccggcacgggaaacatcatcgaggcggtgcggcacgtg
cggtccgtgatgggggacattagggttttgcggaacatggacgatgacgaggtgttcacc
ttcgcaaaaaagatcgcggcgccgtacgatctggtgatgcagacgaagcagcttgggagg
cttccggtggtgcacttcgccgcgggaggagtggcgacgccggctgacgcggcgctgatg
atgcagctggggtgcgacggggtgttcgtcggatcgggcgtgttcaagagcggtgacccg
gcgaagcgggcgagagcgattgtgcaggcggtgacgcactaccgggaccccgatgtgttg
gcggaggtgagctgcgggttgggggaggcgatggtggggttgaacttgaaggatgcgaag
gtggagaggtttgcgaatcggtctgagtga
DBGET
integrated database retrieval system
