Pyrus communis (pear): 137744668
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Entry
137744668 CDS
T10779
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137744668
03036 Chromosome and associated proteins [BR:
pcox03036
]
137744668
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137744668
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
137744668
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
Tex_central_region
HHH_9
HHH_3
S1
SH2
MRP-S34
Motif
Other DBs
NCBI-GeneID:
137744668
NCBI-ProteinID:
XP_068340536
LinkDB
All DBs
Position
9:13583269..13592371
Genome browser
AA seq
1649 aa
AA seq
DB search
MGKAVVSDEEDEVELDEDDREPLHGDAVDGQDGGDEEEDEEEEGPDEYEKDDFIVDDVDE
DDEQEEEEERADSDEERQRKKKRKKKEEYVLDEDDYELLEDNNVIAPRRKAGKFKRLKKA
QRHGVGEPGEFSDEEEFDGSGKGGRTAEEKLERSLFGHDEGTPFEDIVEEEEPEEAEDDG
EVGEEDEMADFIVDEEFDETGTLVRQRKLKRKKSRQAPGVSSDALQEAHDIFGDVDELLQ
LRKQGLDSSEWRERKLEDEFEPIILSEKYMTEKDDQIRELDVPERVQVYEESTGSFPLDG
ISIDDESTWIYDQIASGTIPLFSKPGLANSISREDINRFLDLHHVQKLDIPYIAMYRKED
CLSLLKDPEHLELEDVNQNENEKSSGLKWHKVLWNIQDLDRKWLLLQKRKSALQSYYNKR
FEEESRRIYDESRLTLNQQLFESIMKSLKAAESEREVDDVDTKFNLHFPPGEAGVDEGQY
KRPKRKSLYSVCSKAGLWEVASKFGYSSEQFGLQLSLEKMRMDELEDAKETPEEMASNFT
CAMFETPQAVLKGARHMAAVEISCEPCVRKYVRCNYLDTVELSTSPTPAGNVAIDAFHQF
SGVKWLQRKPLNKFEDAQWLLIQKAEEEKLLQVTIKLPEDRLNKLISDFNEYYLSDGVSK
SAQLWNEQRKLILQDALFSFLLPSMEKEARSMLTSRAKNWLLMEYGKVLWNKVSVRPYQR
KENDNSSDDEPAPRVMACCWGPGKPATTFVMLDSSGEILDVLYTGSLTLRSHNVNDQQRK
KNDQERVLKFMTDHQPQVAVLGAVNLSCVRLKDDIYEIIFKMVEENPRDVGHDMDGLSIV
YGDESLARLYENSRISSDQLPAQQGIVKRAVALGRNLQNPLAMVATLCGPGREILSWKLN
PFENFLTPDEKYVMVEQVMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAASLQRS
LVRSGAIFTRKDLVNPHGLGRKVFVNASGFLRVRRSGLAASSSQYIDLLDDTRIHPEYYI
IAQDLAKDVYDVDGNNDDEDLEMAIEHVRDRPSYLKNLDVEAYAKSKKLENKIQTFYDIR
RELIQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRRVQGQRAICALESGL
TGMLMKEDYSDDSRDMELSDRLNEGDILTCKIKSIQKNRYQVFLSCRESEMRNNRYQNTQ
NLDTYYHEDRRSLQSEQDKAHKEKELAKKHFKPRMIVHPRFQNITADEAMKFLSDKDPGE
SIIRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKDHKDITSLLRIGKTLKIGEDTFEDLD
EVMDRYVDPLVAHLKAILNYRKFRKGTKQEVDELLKIEKLEYPMRIVYSFGISHEHPGTF
ILTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLLAYFQRHIDDPQHESGPSIRSVAAM
VPMRSPAAGGSSGASAGSGWGGSTNEGGWRGQSFDGDRSSTPSSRTGRSDHRNGGSRDGH
PSGLPRPYGGRGRGRGAYNNRGNSTGNERQDSGYDAPAWGSDSKDGDDGLGKFPGAKVQN
SPGREAFPGGWGAGGSGSGGGGSSWGGGASSSGNDAWGGAADNGTSGWGSDTKKKGSGDG
DLGWGSEPKRSTQSQSGNRWSGTDGGGGW
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagctgttgtctctgacgaagaagatgaggtcgagctcgacgaggacgacagg
gaacctcttcacggcgatgccgtcgatggccaggatggtggcgacgaggaggaggacgag
gaagaagaagggccagatgaatatgagaaggatgattttatagtagatgatgtagacgaa
gacgatgagcaagaggaggaagaagagagagcagacagtgatgaagaacggcagaggaag
aaaaaaagaaagaaaaaagaggagtatgtccttgatgaagatgactatgagctccttgag
gacaataatgtaattgcaccccgaaggaaggctgggaaatttaagcgtctgaaaaaagct
cagaggcatggtgtgggggagcctggtgaattttctgacgaggaggagtttgatggtagt
ggtaaaggtggaagaactgcagaggagaaacttgagcgcagcttatttggtcatgatgaa
ggtactccatttgaggatattgttgaagaggaggaaccagaagaagcagaagatgatgga
gaagttggtgaagaggatgaaatggcagactttatagtcgatgaagagtttgatgagact
gggactcttgtgagacagaggaagcttaagagaaaaaaatctaggcaggcaccaggagta
tcatcagatgctttgcaggaagctcacgatatatttggtgatgttgatgaattactacag
ctccgtaagcaaggtttggattccagtgaatggagagaaaggaagctcgaggatgaattt
gaaccaattattctttctgaaaagtatatgacagagaaggatgaccagattcgggagctt
gatgttccagaaagagtgcaggtatacgaggaaagcactggttcttttccactggatgga
attagtatagacgatgagagtacctggatatatgatcaaattgcaagtggtacaatacct
ttgtttagcaagccaggcttggcgaattctataagcagggaagatatcaacagatttttg
gacttgcatcatgtgcagaagctggacattccttatattgctatgtatcggaaagaggat
tgccttagtttattgaaagatcctgaacatcttgaattggaagatgtaaatcagaatgaa
aatgagaaatcgtctgggctgaagtggcacaaggtactttggaatattcaggacttggac
agaaaatggcttctgcttcagaaacgaaaaagtgctctgcaatcttactacaataagcga
tttgaggaagaatcccgacgtatatatgatgagagcagacttacattgaatcaacaactt
tttgagtcaatcatgaagtcgctcaaggctgcagaatcagagagagaggttgatgatgtt
gacaccaagtttaacttgcatttccctccaggtgaggctggagtggatgagggacaatat
aagaggcccaagaggaaatctctttacagtgtctgcagtaaggctggcctgtgggaagtt
gcaagcaaatttggttacagctctgagcagtttggactgcaattatctctagaaaaaatg
agaatggatgagttggaggatgcaaaggaaacaccggaggagatggcttcgaacttcaca
tgtgcaatgtttgagacacctcaagctgtgctcaaaggggctaggcatatggcagctgtt
gagataagttgtgagccatgtgtcaggaagtatgttcgatgcaactacttggatactgtt
gagttatcgacaagccccacacccgccggaaatgtggcaatagatgcttttcatcagttc
tctggcgtgaagtggttgcaaagaaagcccttaaataaatttgaggatgcacaatggctg
cttatccaaaaggctgaggaggaaaagcttcttcaggttactattaagttgccagaagac
agactaaataagttgataagcgactttaatgagtactatcttagtgatggtgttagtaag
tctgcacaactgtggaatgagcaacggaagttgatattacaggatgctctttttagtttt
cttcttccgtcaatggagaaagaagcaagatcgatgttgaccagtagagcaaaaaactgg
ttactcatggaatatggaaaggttttgtggaataaagtctcagtgagaccataccaaagg
aaggaaaatgataatagctcagacgatgaacctgcacctagggtcatggcttgctgctgg
ggccctgggaagccagcaaccacttttgtgatgttagattcatctggggagattctagat
gtactttacacggggtccctcactttacgctctcataatgttaatgatcagcaacgaaag
aaaaatgatcaagaacgtgttctgaagttcatgactgatcatcaaccacaagtcgccgtc
ctaggagctgttaacttgtcttgtgttcgcctaaaagatgatatttatgagataattttt
aagatggtggaggaaaatcctagagatgttggccatgatatggacggtttaagcattgta
tatggggatgaatctttggcccgcctgtatgaaaattctcggatttcatctgatcagcta
cctgcacaacaaggaattgtcaagagggctgtggctcttgggcgtaatcttcaaaatcca
ttggcaatggttgccacactttgtggaccaggaagagaaatcttatcttggaaactcaat
ccttttgagaactttctcaccccagatgagaagtatgtgatggttgaacaggtcatggta
gatgtcacgaaccaggtaggccttgatattaatttggctataagccacgaatggttattt
gcacctttgcaattcatttctgggcttggacctagaaaggcggcatctttgcagagatca
ttggtaagatctggtgcaatatttactcgaaaggatttggtgaacccacacgggcttggt
agaaaggtatttgttaatgcatctggtttcttacgtgttcggcggagtggattggctgct
agcagcagccaatatattgatctgttggatgatacgagaattcatccagaatactacata
attgcgcaagacttggccaaagatgtttatgatgtggatggtaacaacgatgatgaggat
ttggagatggctatagaacatgtccgggatcgacctagttatctaaaaaaccttgatgtt
gaagcttatgctaaaagtaaaaagcttgagaataagatacaaacattttatgatataagg
agagaattaatacagggttttcaggattggcgtaaacaatatgaagaaccaagccaggat
gaagaattctatatgatttcaggtgaaaccgaggatacccttgctgaaggaagaattgta
caggctacagttcgcagggtgcaaggtcagagggcaatttgtgctcttgaatctggatta
actggcatgcttatgaaagaagattattcagatgattcaagagatatggaattgtctgac
agactgaatgagggcgacattctcacttgcaagatcaaatccattcaaaagaataggtac
caagttttcctaagttgtagagagagtgagatgagaaataaccgttatcagaacactcag
aatcttgatacctattaccatgaagaccgaagaagtctacagagtgagcaagataaagct
cataaggagaaagagcttgcaaagaagcatttcaagccaaggatgattgttcatcctcgc
ttccaaaatataactgcagatgaagcaatgaagttcttgtctgataaggatcctggggaa
agtatcattcgtcccagttcccgcgggccttcgtatttaaccttgactctcaaggtttat
gatggagtatatgctcacaaagacattgttgaaggtggaaaggatcataaggatatcacg
agcttactccgcattgggaagactttgaaaattggggaggacacttttgaggatttggat
gaggtaatggatcgttatgttgatcccttggtagctcacttgaaggcaattctaaattat
cgcaagttcaggaagggaacaaaacaagaggtcgatgaacttttgaagattgagaaattg
gagtatcctatgaggatagtttattcttttgggatatcgcatgaacatccaggcactttc
atcctgacctatatacggagtacaaatccacaccatgagtatgttggtctatatccgaag
ggattcaaattcagaaaaaggatgtttgaagacattgatcggcttttagcatattttcag
cgccatattgatgaccctcagcatgagtcaggaccatctattagatcagtcgctgctatg
gtgccgatgcgaagccctgcagctgggggttcttcaggggcatctgcgggcagtggctgg
ggtggatcaactaatgagggtggttggagaggccagtcttttgatggggatcggtcatct
acaccgagttcacgaacaggtcgaagtgatcatagaaatggtggtagtcgggatgggcat
ccaagcggcctacctagaccatatggtgggcgtggtcgtggtcgaggagcatataacaac
agaggaaatagcactggcaatgagaggcaggattctggttatgatgctcctgcgtggggt
tcagattccaaggatggggatgatggtttgggcaaatttccaggtgcaaaggtccagaac
tcacctggaagggaagctttccctggtggttggggtgctggtggaagtgggagtggaggt
ggtggcagtagctggggcggtggagctagctccagtggaaatgatgcatggggcggtgct
gctgataatgggacttcaggatggggttctgacaccaagaaaaaaggttccggtgatgga
gatttgggatggggttctgaaccgaaaagaagtacccagtctcagtctggaaacagatgg
tctggaactgacggaggtggcggttggtga
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integrated database retrieval system
