Pyrus communis (pear): 137744787
Help
Entry
137744787 CDS
T10779
Name
(RefSeq) polyadenylation and cleavage factor homolog 4-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137744787
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
137744787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137744787
NCBI-ProteinID:
XP_068340686
LinkDB
All DBs
Position
9:complement(25993311..26000220)
Genome browser
AA seq
1063 aa
AA seq
DB search
MEMESSRRPFSRSNEPGLKKPRLAENPNGRAFGQRPVGGANPVLSRFRVSDRNVGSDDPN
RGGGGYVPQPLQHQELVSQYKTALAELTFNSKPIITNLTIIAGENVHAAKSVAATVCGNI
IEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVEPPIHQSMRHLFGTW
KGVFPAQTLQMIEKELGFSSTANGSSSGAATSRPDSQSQRPAHSIHVNPKYLERQRLQQP
ARAKGMASDFSGVTANSIDDDAEMLARAASISAGRPWVDPAVNLHRSNTDALSARVHEEN
IGAEYGEYEYGSDLHRNSNPGMRRIGGKITETLPTQRNGFNIKHGLTNYSAPKSTNADPR
LKTAPGIATRNSGGLSSSWKNSEEEEFMWDDMNSRLTDHGPPDISSNSRKDHGASDDSEK
LGFGGQLRKPKGVNDYASTADLDTSADPTEQKDLSALGQRMSSPWTLQDSIGVDRLTPSG
TPVISSVHSERYASSLSGLSTSGDSSVARMGSRAQVASSRIGTSCLGFNAAAGPTGALGK
QQLQSVRAASPSEQSSMHQYSPSPTSAVHPRHHSQSLADQDFAEDPLPIPTPNVRLGSKA
KTQPQDISSSIPDIQSSHKYPFRQQPDSIESESFGRIKKPHVPQVSTFSTPSTVGDSIPG
LSNVLSAESSGQLSTSSLLAAVMKTGILSDKSITFSLPNLNRRDMGHIPSESGVQPPLQS
GPSPTLALPGPKVASAPSSGHLSGENSPASSNVSQKKVAHLPIPPSQPPSSLDGSASESS
TVVNNASDPISNLLSSLVAKGLISASKSESPTPVPSQKLTEPHNKSLGAPASKSVTVSPV
SVSVSPSRPVTSQTDDASLPEPVAKTSAAVPQSTKTEIRNLIGVAFKPDKIREFHPAVID
ELFNDLPHTCSICGLRLKLKERLERHLKWHASKNPEGNGSVMASRKWYPDLTSWVAGRTG
PPLVLEAINSIDEPNEMMDIDEPIVPADENQCVCVICGGIFEDFYCQERDEWMFKGASYM
SIPSGAGEMETTEESVLKGPIVHANCTVEGSLSDSHVKLEPDA
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagagctcgcgtaggccgtttagcagatcgaatgaaccaggcctgaagaag
ccccgattggccgaaaacccgaatggccgagcttttgggcagagacccgttggtggagct
aatccagtgctgtcaaggttcagagtgagtgatagaaacgtggggagcgatgatccgaat
cgcgggggtgggggctatgtgccgcagccactgcagcatcaggagcttgtgagccagtac
aagacggcgttggcggagctcaccttcaattcaaagccaattattaccaatttgacgata
attgccggcgagaatgtccacgccgcgaagtcggtggcggcaactgtatgcggcaacatt
attgaggttcccagtgagcagaagttaccatcactttatcttttggacagtattgtaaag
aatattggaagggattatatcaaatattttgctgccagactccctgaggtgttctgcaag
gcatataggcaggttgaacctcctatacatcaaagcatgcggcatctttttggaacatgg
aaaggagtgtttcctgctcagacgcttcagatgattgagaaagaactcggattttcttct
acagcaaatggttcatcctctggagcagcaacatcaagaccagattcacagtcacaacga
ccagcacatagcattcatgtgaatcccaaatatttggaaaggcaacggcttcagcagcca
gcaagggcaaaaggaatggctagcgacttttctggggttacggcaaactcaattgatgat
gatgcagagatgctagccagagcagcaagtatcagtgctggacgaccatgggttgatcct
gctgttaatttgcatcgttccaatacagatgcactaagtgctcgtgttcatgaggagaac
attggtgccgaatatggagaatacgaatatggttcagatcttcacaggaattcaaacccg
ggaatgcgaagaattggtgggaagattacagaaacactgcccacccaaagaaatggtttt
aatatcaagcatggacttacaaattactcggcacctaaatctactaatgctgatcctcgc
ttaaagacagcaccaggcattgcaactagaaacagtggtggcctgtctagtagctggaag
aactctgaggaagaggagttcatgtgggatgatatgaactcaagattaacagatcatggc
cctccagatatttctagtaactcaagaaaagatcacggggcttctgatgattcagagaaa
ttgggctttggaggtcagttgcgtaaaccaaaaggtgtaaatgattatgcatcaacagct
gatctggatacctctgctgatcctactgaacagaaagacctatctgctcttggtcagcga
atgtcatcaccttggacattgcaggactctatcggtgttgacaggctgaccccttctggt
actcctgtcattagttcggttcattcagagcgttatgcttcaagtttaagtgggctatcg
acaagtggagattcttctgtggccaggatgggaagtagagcacaagtagcgtcttctcga
atcggaacgtcatgtctagggtttaatgcagcagcagggcctactggagctttagggaaa
caacagcttcagtctgtgagagctgcatcaccatctgaacagtcatcgatgcaccaatat
tctccttcacctacatctgcagtacatccccgtcatcactcgcaaagtttagctgaccaa
gactttgctgaggaccctttgccaattccgactcccaatgttcgattgggcagcaaagca
aaaacacagcctcaagatatatcttcgtcaattcctgacatccaatcaagtcacaaatac
ccctttcgacaacaaccagacagtatagagtctgaatccttcggtcgcattaagaagcct
catgtgccacaggtctctactttttcaactccctcaactgttggagattctataccaggt
ctttcaaatgtcctttctgcagaatcctcaggacagttgagcacaagtagtttgttggct
gctgttatgaagactggaatactctctgacaaatcaattacttttagcctgcccaatttg
aatcgtcgggacatgggacatattccatcagagtctggtgttcagcctcccttgcaaagt
ggaccctcccctacccttgcactcccagggcccaaggttgcatcagcaccttcatcaggt
cacctttctggtgagaactcgccagcttcctcaaatgtatcacagaagaaggtagcacat
ctgccaattccacctagccaacctccttcctctcttgatggcagtgcgtcagaaagttca
actgtggtgaataatgcctcagatccaatttcaaaccttttaagctccttagttgcaaag
ggtttgatatctgcatcaaagtcggagtcacccactcccgtgccatcccaaaagctgact
gaaccgcacaacaagagcctaggtgcacctgcctccaaatcagtgacagtatctccagtt
tcagtttcagtctctccaagtcgtcctgttacatcccaaactgatgatgcatctctccca
gaacctgtagctaaaacatctgctgccgtacctcaatctaccaagacggaaataagaaac
ctcataggcgttgcctttaagccagataaaatccgagaatttcatccagctgtgatagat
gaactttttaatgaccttccacatacgtgtagcatatgtggccttaggctcaaactaaaa
gaacgacttgagagacatttgaaatggcatgcttcgaaaaatcccgaaggtaatggttca
gttatggcatcaaggaagtggtatccagatttaaccagctgggttgctggaaggacagga
ccccctttggtattggaggccatcaattcaatagacgagcctaacgagatgatggatatt
gatgagcccatagttccagcagacgaaaaccaatgtgtatgtgttatatgtggtggtatt
tttgaagatttttactgtcaagagagggatgaatggatgttcaaaggagcttcgtacatg
agtattccatctggggccggtgagatggaaaccacagaggagagtgttttgaaaggtccc
attgtgcatgcaaattgtacagtggaaggttcactctctgatagccatgttaaattggaa
ccagatgcttag
DBGET
integrated database retrieval system
