Pyrus communis (pear): 137744948
Help
Entry
137744948 CDS
T10779
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137744948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137744948
Enzymes [BR:
pcox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137744948
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
137744948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_C101
BUD22
Motif
Other DBs
NCBI-GeneID:
137744948
NCBI-ProteinID:
XP_068340872
LinkDB
All DBs
Position
9:21407189..21426027
Genome browser
AA seq
1684 aa
AA seq
DB search
MASSEVPTASTEAIKFAFLTDEEVRQHSFLRVTDPSLLTQLGNPVAGGLYDKALGPIDDK
PGESCGTCGEKSRNCPGHCGHIDLALPVYNPLLFNTLFKLLQRTCFFCYHFRTDQTHVEK
AVSQLKLIMEGDVVGAKMLDSDSPSEYLDCNEGDSHSDKHAKQQGWTSLQFTELMSVFYK
ALPKQGKDCNNCKAKNPKIIKPTFGWFQMSGAENARENVIRGCNLVGPLTGQDEGDENEN
VDNNDMEKHNGEGSKVPSEFLNQTTSLSGDLLPKQVQDIIKLLWDNEAEFCSFIGDIQCQ
GIGRKAGHSMFFLETVLVPPIKFRPPSKGGDSVMEHPQTVLLSKVVQANNSLQESVVTKS
DPSKTIRQWRDLQEYINVMYNSKTATGKGQKDADPGICQLLEKKEGLFRQKMMGKRVNYA
CRSVISPDPYLAVNEIGIPPYFATRLTYPERVTPWNVDKLRNAIVNGPEIHPGATQYVDK
SSVKMLRQNRRERISTARKLPSSKGLATQHGKGSDNSYENKVVFRHLRDGDIVLVNRQPT
LHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN
NQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWEEFNQLLYSSCVSARRSDALSGKPD
QKVFMCNIEGTMQPLLPAIWKPERLWTGKQVITALLNHITRGSPPVTVEKDAKIPRGFFN
CNLEEEKFDEEELQKKKKRSKGKQADECGSQNEKKPDKKVDNDKSKDTGVVDENSLLIYK
NNLVRGVIDKAQFGDYGLVHTVQELYGSDAAGILLSVLSRLFTVYLQMHGFTCGVDDLLV
MPSKDTKMKEQLESCEEIGEKVFRDFIEVEDDKRKDLVALQLNIEKFIRSNGESALAALD
RRMISQLNNKTSNSDVFKQLLLKGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQE
LEGKRVPQMVSGKTLPCFHPWDWSSRSGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAV
KTSRSGYLQRCLIKNLECLKVCYDHTVRDADGSIVQFYYGEDGVDVHLTSFLQKFDSLAA
NKEMFQNKFHRQIDKSDPYIAELPSALKYKAEKFVLDLSLKEESHNLFSQVDFLKLMEHK
YLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANEI
KTPVMTCPLRKGRSKEEAQHLANKLKKITVADIIESMEVTLLPFVLQGLETCRIYKLQMK
LHIPEHLQNIVQDISEDWEEILEVMFVRALEDAIQSHVLLLSKISGIKNVTDAPQKASNE
TDENISKSGHQHQEEDDDNDGADDGEGAEDFGMDAQKRKLQAFDEMDYEDGCEDEVRDGD
LTDGDEVENDVDNDEENDVETGKDGTIEVVDATDEMPASPLEEAGDLPKPKSKEKKNKSG
ATIKKKKIRAQLVRKDTDRSIFVSAKGFHFEVHFKFTDEPHILLAQIAQQTAQKVSMQRS
GSVDDCKQITCDENQVLLYGKDPENKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVR
YLYSNNIHAMLNTYGVEAARETIIREIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMN
RFGGIAESISPFNKMSFETASKFIVEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQ
KIEV
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcagaggttccgacggcgtccactgaggcgattaagtttgctttcttaact
gacgaggaggtgcgacagcacagctttctgagggttaccgacccatctctccttactcaa
ttaggaaaccccgtggccggtgggctatacgataaggcactcggcccaattgatgacaaa
cccggcgaaagttgcggaacatgtggtgagaagtcgcgtaattgcccgggtcattgtggt
catattgaccttgcgttgccagtttataatcccttgctgttcaatactcttttcaaactt
ctacaaagaacgtgtttcttctgctaccattttcggacagaccaaacacatgttgagaaa
gctgtttcccaattaaaactcataatggaaggtgacgtcgttggggctaaaatgttagat
tctgactcacctagtgaatacttagactgcaacgagggagatagtcacagtgacaagcat
gcaaagcagcaaggatggacttctcttcagtttacggagctaatgtctgttttttataag
gctttgccgaaacaagggaaggactgcaacaattgcaaggcgaagaatcccaaaatcatc
aaacctacttttggatggtttcaaatgagtggtgctgaaaatgcgagagaaaatgttatc
agagggtgcaacctggtgggacccttaactggtcaagatgaaggggatgagaatgaaaat
gttgacaataatgatatggaaaagcacaatggagaaggaagcaaagtgccaagtgagttc
cttaatcagacaacttccttgtcgggagatctattaccaaaacaggttcaagacatcata
aagcttttgtgggacaatgaagctgagttctgctcttttattggtgatatccaatgccaa
ggaattggaagaaaagcaggtcactctatgtttttcttagagactgtacttgtgccacca
atcaaatttcgtcctccatccaagggtggtgattctgtgatggagcatcctcaaaccgtt
ttattaagtaaggtggtgcaggcaaataattctttgcaagagtctgttgttaccaagtcc
gacccctcaaagacaattcggcagtggagggatcttcaagagtacataaatgtgatgtac
aatagcaaaactgctactggtaaaggtcaaaaagatgcggatcctggaatatgtcagttg
cttgagaagaaggaaggcctgttccggcagaaaatgatgggcaaacgggttaattatgca
tgtcggtctgtcatatccccagatccctatttagctgttaatgagattggaattcctccg
tattttgcaactagattaacatatcctgagagagttactccgtggaatgttgacaagttg
aggaatgcaattgtcaacggtcctgaaatccatcctggagctacacagtatgttgataag
tcctctgtgaagatgttgagacaaaaccggagagaacgcatttcaacagcaagaaaatta
ccttcttcaaaagggcttgctacacaacacggaaaaggatctgataatagctatgaaaac
aaagttgtttttcgtcacttgcgagatggggacattgtgcttgtcaatcgacagcctaca
cttcacaaacccagtataatggcgcatgtagttcgtgtattgaagggggagaaaacaatt
cgtatgcactatgcaaattgcagtacgtacaatgctgattttgatggtgatgaaatgaat
gttcattttccacaagatgaaatttctcgagcagaagcttacaatatcgtaaatgcaaat
aaccaatatgtaaagcctaccagcggtgatccaattagagccttgattcaggaccatgtc
ataagtgctgtcctccttacaaagaaggatacctttttgcgctgggaggaatttaatcag
cttctttatagttcatgtgtttcagcccgtcggtcagatgctttgtctggaaaaccagat
caaaaggttttcatgtgtaacattgaaggcacaatgcagccccttcttcctgctatttgg
aaaccagagcgtctttggactggaaaacaggtcatcactgccttgctaaatcatattact
aggggttctccgccagttactgtagaaaaggatgcaaaaatcccacgtggtttttttaac
tgtaatcttgaagaagagaaatttgatgaagaggaactacagaaaaagaagaaacgaagc
aaaggaaaacaagctgatgaatgtggatcacagaatgagaagaaaccagacaaaaaagta
gataacgataaatcaaaggacacaggggttgtagatgagaacagtttattaatctataaa
aacaatttggtgcgcggtgtgattgacaaggctcagtttggtgattatggtttggtccat
acagtgcaggagctctatggctcagatgctgcaggaatattgctttctgtattgagtcgt
ttgtttactgtttatttgcagatgcatgggttcacatgtggtgttgatgatcttctggta
atgccgagcaaagacacaaaaatgaaggaacaacttgaaagttgtgaagagattggtgaa
aaagttttccgtgattttatcgaagtcgaagatgataaaagaaaagatctagtggcactg
caattgaacattgaaaaatttatacggagtaatggagaatctgccttggcagccttggat
aggagaatgattagtcagcttaataacaagacctccaactctgacgtcttcaaacaatta
ttgttgaaagggttatcaaaaccgtccgttaagaattgtatctatcttatgaccacatct
ggggctaaaggtagtgtggccaacctccaacaaataacttcgtatttgggtcagcaagag
ctagaaggcaaacgggtgcctcaaatggtttctggaaagaccttaccgtgctttcaccca
tgggattggtcatctcgatctggaggctttattattgatcgttttcttactggtcttcgg
cctcaggagtattattttcattgcatggctggtcgtgaagggttggttgatacggctgtc
aaaacatctcgtagtgggtacctgcaaaggtgcctaataaaaaatcttgagtgcctaaaa
gtttgttatgaccataccgtccgtgatgctgacggttccattgttcaattttattatgga
gaagatggtgttgatgtccatttgacaagcttcctacaaaaatttgactccctggcagct
aataaagaaatgttccagaacaaattccatcgacaaatcgacaaatccgatccttacatt
gctgagctgccttcagctctcaagtataaagcagagaagttcgtgcttgatttgtccttg
aaggaggaaagtcataacttattcagccaagtggatttcttgaagttaatggagcataaa
tacctctctagtcttgctcaacctggagaaccagttggtgttcttgctgctcagtcagta
ggagaaccgtcaactcagatgacactgaatactttccatcttgctggaagaggtgaaatg
aatgtgacacttggaatccctcgtcttcaagaaatcttgatgactgctgcaaatgagatt
aagactccggtcatgacatgtccattgcgaaaagggagatcaaaggaggaagctcagcat
ctagctaataagttgaagaagatcactgtggcagacataatagagagtatggaagttacg
ttgttgccatttgtccttcagggtcttgaaacttgccgtatttataaacttcaaatgaaa
ctccacatacctgaacatcttcaaaacatcgttcaagatatatcagaagattgggaggaa
atcctagaggttatgtttgttagggcgttggaagatgccatacaaagtcatgtgctcttg
ctttccaaaattagtggtataaaaaatgtcactgatgcaccacaaaaggcatcaaatgag
acggatgaaaatatttctaaaagcggacatcaacatcaggaagaagacgatgacaatgat
ggtgcagacgatggtgaaggggccgaggattttggtatggatgcacaaaagcgaaagctt
caagcttttgatgagatggattatgaagatggatgtgaagatgaagtgagagatggagat
ctgacagatggagatgaagtcgaaaatgatgtggataatgatgaggagaatgatgttgaa
actggtaaggatggtacaattgaggttgtagatgctactgatgaaatgcctgcaagtcct
ttagaagaggctggagacctgcctaagcccaagtcaaaggagaaaaagaacaaatcagga
gccacaattaaaaagaaaaagatcagagctcagttagtaagaaaagacaccgacaggtca
atatttgtgtcagcgaaggggttccactttgaggtccattttaaatttaccgatgaacct
catattttgctggctcagattgctcagcagacagcccagaaggtttctatgcaaagatct
ggcagtgttgatgactgtaaacaaataacttgtgacgaaaatcaagtcctcttatacgga
aaggatcctgagaataaacaaagttattcatccaaggaaaaaaaggagatggcagctctg
cagactactggagtggatttccgtacattttggaaattgcaagatgttcttgatgtcagg
tatttatattccaacaacatacatgctatgctgaacacttacggagttgaagccgccagg
gaaactatcatcagagaaattatgaacgtttttaagtcttacgggatatcagtcaacatt
aggcaccttacgcttatagctgactacatgactcactcgggtggttatcgaccaatgaat
agatttggaggcatagcagagtcgatatctccgtttaataaaatgtcttttgagacagct
tctaagttcattgtcgaagcagcatatcacgggcagacggatgatttggaaacgccatcc
tcgaggatctgtcttggattgccagtcaaggtaggcactggatgttttgatttgatgcag
aagatagaggtttag
DBGET
integrated database retrieval system
