KEGG   Pyrus communis (pear): 137745068
Entry
137745068         CDS       T10779                                 
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
  KO
K20827  RNA polymerase II-associated protein 2 [EC:3.1.3.16]
Organism
pcox  Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pcox01009]
    137745068
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcox03021]
    137745068
Enzymes [BR:pcox01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     137745068
Protein phosphatases and associated proteins [BR:pcox01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   137745068
Transcription machinery [BR:pcox03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     137745068
SSDB
Motif
Pfam: RPAP2_Rtr1
Other DBs
NCBI-GeneID: 137745068
NCBI-ProteinID: XP_068341042
LinkDB
Position
9:complement(3762719..3766814)
AA seq 705 aa
MEKSQPPPQHQQPMSVKETVYKLQLALLDGVKTLDQLYLAGSIISRSDYSDVVTERTIAD
HCGYPLCPHALPPESSRPRKGHYRISLKEHKVYDLHETYMYCSSSCLIESKAFAQSLSEE
RCDVLDYGKVEKVLRAFGDVGLDKGEVGLGETGDLGISKLKIEEKSEAEIGDLGISKLKI
EEKSEVQLGDVGVVGPSNAIEGYVPHNQRISKPLGSKKNKKGSKGKEAKTSGGKDMIFNE
MDFMSCIIASDEYSVSKIPPNSGENGCETKFKESEEKVAHIKNDSEKKSKQSRGGKSKIS
KEDDVGIREAPSTSETSQTILIRSTKEAREEFPGDKEKSNVPKLRSSLKPSGAKKLNRSV
TWADEKVEHRMNDYDTLGSIHKPLLKPSAENEVGCSVTWSDEKIDSTKSKNVCEVREVQG
AKEGSGVLGNLELLDNERLESAEFCAMALRRVAEAVASGESDVNDAVSSAGIILLPRPDG
ADEEEPTEDVDMLEPEQAPLQQRNPGIPNFDLFDSEDTWFDDPPEGFNLTLSPFLTMWNS
LFTWITSSTLAYIYGRDESFHEEFLSINGKEYSRKIVLAGGHSSEIKKTLAESLARTLPG
VVSQLRLATPISSLEQEMSCMLETMTFVDALPAFRMKQWKVVVLLLLEGLSVCRIPALGP
HMPDRRTLFDKVLDGSQITAEHYELMKDHMLPLGRAPEFSAQSGA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggagaagagccaaccgccgccgcagcatcagcagcccatgtcagtgaaagaaacagtg
tacaagctccaactcgctctcctcgacggcgtcaaaacccttgaccaactctacttggcc
ggctcaataatctcccgctccgattacagcgatgtcgtcacggagcgcaccatagccgac
cactgcggctaccctctatgcccccatgccttgcctccggaatcctcccgcccccgcaag
ggccactatcgcatttcactcaaggagcacaaggtctacgaccttcatgagacctacatg
tactgctcctcgagctgtcttatcgaaagcaaggcttttgctcagagtttgagcgaggag
aggtgcgatgtcttggattatggcaaggttgagaaggtcttgagggcttttggggatgtg
ggtttggacaaaggggaagtgggattgggggagactggggatttgggaatttcgaagttg
aagatcgaagaaaagagtgaagcggagattggggatttggggatttctaagttgaagatt
gaagaaaagagtgaagtgcagttaggggatgtgggcgtggttggtccctctaatgctatt
gagggctatgttccacacaatcagcggatatccaagccattgggttcgaaaaagaacaaa
aaagggtccaagggtaaagaagcgaaaacgagtggcgggaaagatatgatctttaacgag
atggatttcatgagttgtataatcgctagtgatgaatacagtgtgtccaaaattccacca
aattctggggagaatggttgtgaaactaagtttaaggaatcagaagaaaaagttgctcat
attaagaatgattctgaaaagaaatccaaacaatcaagagggggaaaaagtaagatttcc
aaggaagatgatgttggcattcgagaggcgccttcaacttcagagacttctcaaactatt
ttgattagaagtactaaagaagcaagagaggaattccctggtgataaggagaaatcaaat
gtgccaaagctaagatcctctcttaaaccttcaggggcaaaaaaacttaatcgctctgtt
acttgggctgacgagaaggtggaacatagaatgaatgattatgatacattgggtagtatc
cacaaacctttgcttaaaccttcagcggaaaatgaagtcggttgctctgttacctggtct
gatgagaagattgatagcactaagagtaaaaatgtttgcgaggttagagaagtgcaaggt
gcaaaagagggttctggtgtattagggaatttggaattgctagataatgaacgtttggaa
tccgcagaattttgtgccatggcattgaggcgggtagcagaagctgttgcatctggagaa
tctgatgtcaatgatgctgtttcgagtgctggaattattttattgccacgtccagatggt
gcggatgaagaagagcctactgaggatgttgacatgcttgaaccagaacaagctcctctg
cagcaaagaaatcctggaattccaaattttgatttgtttgactctgaggatacttggttt
gatgatccaccagagggtttcaacttaactttatcgccttttttaacaatgtggaattca
ctctttacatggataacatcatctacactggcatatatatatgggagggatgaaagcttt
catgaagaatttctctctattaatgggaaagagtattcccgtaagattgtcttggctggt
ggccactcttctgaaatcaagaaaactctggctgaatctcttgctcggactctaccagga
gttgtttcccaacttaggcttgcaacaccaatatctagtttggagcaagaaatgagctgc
atgttggagacgatgacttttgttgacgcgctaccagctttcagaatgaaacaatggaaa
gtggttgttcttcttctccttgaaggtctctctgtttgcaggattcctgcactcggtcct
cacatgccagatagaaggacactgtttgacaaggtgctggatggttcccagataactgca
gaacactacgagcttatgaaggatcatatgttacccctaggccgagcacccgaattctca
gctcagagtggtgcttaa

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