Pyrus communis (pear): 137745604
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Entry
137745604 CDS
T10779
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137745604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137745604
NCBI-ProteinID:
XP_068341681
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Position
9:complement(26579000..26587058)
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AA seq
914 aa
AA seq
DB search
MSQDAMTVNQSPPLQSRSDALENLTKGPLSSSISKLSGSSRFLPNSKDFYFYRNFDEFKA
PIEKITKEAQTMLGSIGSSAPVLGKPMAFPQDLDDGYDWLVNVNDEVLERFDSSVDEFKR
VRKEAEEAKRPTSAALDTDDGFQLVCGKKKKKGSTGLASASGNDDSSQVSTAVKVAAKDK
KTVAATKPKVPFHIPSIRRSQEEFNILVNNANQPFEHVLLQRSEDGQRFLHPLEELSVLD
FVDNNVGDVESVKPPSLKSTPFKLVEEVKDLEELAAKLRAVNEFAVDLEHNQYRSFQGLT
CLMQISTRAEDFIVDTLKLRIHVGPYLREVFKDPAKRKVMHGADRDISWLQRDFGIYICN
LFDTGQASRVLKLERNSLEYLLQHLCGVTANKEYQNADWRLRPLPEEMVRYAREDTHYLL
HMYDLMRTQLCMMPKESENSDTPLVEVYKRSYDICMHLYEKDLLTENSYLHIYGLQGAGF
NSHQLAIVSGLCEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTTSKLKRLVKSKHPYI
ERNLGSVVSIIRHSVQNAASFQPAVEHLAARARMASEERILVNDGSEALLPDQSVSNSTN
ADVSVVSPPSQQHKMEYKEIAFGASELVRNGQGNSLETGSPISVNLRQNSVLGQNREASS
IACLLDSAKVTGVSVQVQKKPSRAFSSLLGSSVPKRKFDADKKDKEGNKLEQIRSSVNFP
FHSFSGGSEKTKPIVEAQDKSSDIPHSEGPLTASPPRSGLDDIITLESDSDGGEPVDGSS
EARNEPEDNDSVPSALERDREDEPVSLCGLSSSFENCIQSFNQNRKTIEVEKSQESGGLQ
VKPFDYEAAKSEVIFGAKPVREAGAAEGVKSLNSAGKKKSLAGRVSNDDGSKELGQGRRR
QAFPATGNRSATFR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagacgccatgacagtgaaccaatctccgccgctgcagtcgaggtccgacgcc
ctagaaaacctaaccaaaggcccactctcctcgtcgatttccaagctctccggctcctcg
cgattcttgcctaacagcaaggacttctatttctaccgcaacttcgacgaattcaaagcc
ccgatcgagaaaatcaccaaggaggcgcagacgatgctcggctcgattggctcatcggcg
cccgttttggggaaaccgatggctttcccccaagacttggacgacgggtacgattggctc
gttaatgtgaacgacgaggtgctggagaggtttgactcgtcggtggatgagttcaagagg
gtgaggaaggaggcggaggaggccaagcggccgacgagtgcggcattggacacagacgat
gggtttcagttggtgtgtgggaagaagaagaaaaaggggtccactgggttggcttcggcc
agtgggaacgatgattcgagtcaggtttccaccgccgtgaaggtggctgccaaggacaag
aaaactgtggcggcgacgaagcccaaggttccgtttcatataccaagcattcggaggtct
caggaggagtttaacattttggttaacaatgcaaaccagccgtttgagcatgttttgttg
cagagaagtgaggatggtcagcggttccttcatcccctagaggagctttctgttctggat
tttgttgacaacaacgtcggggatgttgagtctgtaaaaccgccttcattaaagtctacg
ccattcaagcttgtggaggaggtcaaagatctggaagagctagcagctaagctccgtgct
gttaatgaatttgcggttgatttggaacacaatcaatatcgatcgtttcaaggattgact
tgcttgatgcaaatttcaactagagccgaagattttatagtagatactctgaagcttaga
attcatgttgggccatatcttagggaagttttcaaggaccctgccaagagaaaggtgatg
catggagcggatcgtgatatcagttggctccaacgtgattttggcatttatatctgcaat
ttgtttgatactggccaggcttcaagggtgttgaaattggagagaaatagtttggaatat
cttctacagcacttatgtggtgttactgctaacaaagaataccagaatgcagactggaga
ttacgccctctgcctgaggagatggtcagatatgccagagaagatacacactatttgttg
catatgtatgatttgatgagaacacagttatgtatgatgcccaaggaatcagaaaactct
gacactccattagtagaggtttacaaacgcagttatgatatatgcatgcatctgtatgag
aaagatcttttgacagaaaattcttatctccacatatacgggttgcaaggtgctggtttc
aattctcatcagcttgccattgtttccggtctttgtgagtggagggacgttgttgcccgt
gcagaggatgaaagtaccggctatatattaccaaataaaactcttcttgaaattgctaaa
cagatgcctgtcaccactagcaagttaaagcggttggtgaaatcaaagcacccgtacatt
gagcgtaatcttggttcagttgttagtatcattagacattctgtgcaaaatgctgcttct
tttcagcctgctgttgaacatctggcggcacgcgcaagaatggcatctgaagagagaata
ttggtcaatgatgggtctgaagccttgttaccggatcaatctgtcagcaattcgactaat
gctgatgtatctgtggtttcacccccgtctcagcagcataaaatggagtataaggagatt
gcatttggtgcctccgaactagtaagaaatggacaaggaaactctcttgaaactggcagc
cccatttcagtaaatcttagacaaaacagtgttctgggccaaaacagagaagcaagcagc
attgcctgtttattagattcagcaaaggttactggagttagtgttcaggtgcaaaagaag
cctagccgtgcctttagttcgctgttggggagttcagttccaaaaagaaagtttgacgcc
gataaaaaggacaaggaaggtaataagttggagcaaattagatcttcagtgaacttccca
ttccactcattttcgggcgggagtgagaaaaccaaaccaatcgtggaagcacaagataaa
agttcagatattccccattctgaagggccgcttactgcatcaccccctaggtctggttta
gatgacatcataacgttggaaagtgactcggatggaggtgagccagtagatggttcctca
gaagccagaaatgagcccgaggataatgattcagtaccatcagctttggaaagggatagg
gaagacgaacctgtgtctctctgtggtttgtcctcaagcttcgaaaattgcatccagtcg
tttaaccaaaacaggaagacaatagaagtggagaagtcccaggaatctggtggtttgcag
gtgaagcccttcgactatgaggcagcaaagagtgaggtcatatttggagctaaaccggtc
agggaagctggagctgcggaaggtgtgaagagcttaaattcagcgggaaagaaaaaatct
ttagctggtcgagtttcaaacgatgatgggtcaaaagaactaggacagggtagacgacgt
caagcttttccggcaactggaaatagaagtgcgacgtttcgttaa
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