KEGG   Pyrus communis (pear): 137745617
Entry
137745617         CDS       T10779                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03030  DNA replication
pcox03410  Base excision repair
pcox03420  Nucleotide excision repair
pcox03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137745617
   03410 Base excision repair
    137745617
   03420 Nucleotide excision repair
    137745617
   03430 Mismatch repair
    137745617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcox03032]
    137745617
   03036 Chromosome and associated proteins [BR:pcox03036]
    137745617
   03400 DNA repair and recombination proteins [BR:pcox03400]
    137745617
DNA replication proteins [BR:pcox03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137745617
  DNA Replication Termination Factors
   ELG1-RFC complex
    137745617
Chromosome and associated proteins [BR:pcox03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137745617
DNA repair and recombination proteins [BR:pcox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137745617
  Check point factors
   HRAD17(Rad24)-RFC complex
    137745617
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 Mg_chelatase RuvB_N DUF815 AAA_22 RsgA_GTPase ABC_tran AAA_29 AAA_24 AAA_23 AAA_2 AAA_5 AAA_16 T2SSE
Other DBs
NCBI-GeneID: 137745617
NCBI-ProteinID: XP_068341695
LinkDB
Position
9:26468885..26472991
AA seq 354 aa
MLWVDKYRPKTLDQAIVHQDVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLIIALLRQIFG
PSADKVKVENRAWKVDAGSRTIDIELTTLSSTNHIELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINSPTEDQIVKVLDSIGKKEGLQLPSGFVARIAEKSNRSLRRAILSLETCRVQQY
PFTSNQAIPPMDWEEYVSEIASDIMKEQSPKRLYQVRQKLYELLLNCIPPEIILKRLLFE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIEAFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtcgacaagtaccgacccaaaaccctagaccaggcaattgtccaccaagac
gtcgcccaaaacctcaagaaactcgtcgcggagcaggactgcccccatttgctattttat
ggcccttctggttccggcaagaaaaccctaatcatcgcccttcttcgtcagattttcgga
cccagtgccgataaggtgaaggtggaaaacagggcatggaaagtcgatgctgggagtaga
acgattgatatagagctgactacattatcgagcaccaatcatattgaactgaaccccagt
gatgcagggtttcaagacagatatattgttcaagagataatcaaagaaatggctaaaaat
agacccattgacacaaaagggaaaaaaggatataaagtcctagtgctgaatgaagttgac
aaactttcaagggaagcgcagcattcacttagaagaactatggagaaatatagtgcttat
tgccggctaatactatgctgtaacagttcttcaagggttactgaagcaatcaggtctcga
tgtcttaatgtgcgaataaattcaccaacagaagatcagattgtgaaggtattggattcc
atcggaaagaaagaagggctgcaacttccttcaggatttgttgctcgtatagctgaaaaa
tccaataggagcttaaggagagctatattgtcattggaaacttgtcgtgttcaacaatat
ccgtttacaagtaaccaggccataccacctatggattgggaagaatatgtgtctgaaatt
gcatctgatataatgaaggagcaaagccctaaaaggctttatcaagtgcggcaaaagtta
tatgagctgctgcttaattgtattcctccggagatcatcttgaagagacttctttttgag
ttattgaagaagttggatgcggagttgaagcatgaggtttgtcattgggctgcatattat
gaacataggatgcgtcttgggcaaaaagccatatttcaccttgaagcgttcgtggccaag
ttcatgagcatttataaggcattcctcatcgaagcgtttggctga

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