KEGG   Pyrus communis (pear): 137745784
Entry
137745784         CDS       T10779                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03020  RNA polymerase
pcox03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137745784
  09124 Replication and repair
   03420 Nucleotide excision repair
    137745784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcox03021]
    137745784
   03400 DNA repair and recombination proteins [BR:pcox03400]
    137745784
Transcription machinery [BR:pcox03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     137745784
DNA repair and recombination proteins [BR:pcox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      137745784
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 137745784
NCBI-ProteinID: XP_068341901
LinkDB
Position
1:26340702..26342856
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQISQVFEKSLQ
YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHD
DDAIDKMLNDLALIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggggaagaggaagaaaacgccgccgagcttaaaatcggagacgagtttttgaag
gcaaagtgcttaatgaactgcgaagtttctttgattctggaacacaagttcgagcagctt
caacagatgtctgatgatcccaggaaccaaatttcgcaagtatttgagaagtcactgcag
tatgtgaagcgcttcagccgttacaaaaatcccgacgctgttaaacaagttcgagaaatc
cttagtagatatcagctgactgagttcgagctctgtgttctcggcaatctctgccctgaa
actgttgaggaagctattgctatggttccatctataaaggcaaaaggacgggttcatgac
gatgatgcaattgataaaatgttgaatgacctggcgctaatcaagaaatttgagtag

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