Pyrus communis (pear): 137745863
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Entry
137745863 CDS
T10779
Name
(RefSeq) phytochrome A-2-like
KO
K12120
phytochrome A
Organism
pcox Pyrus communis (pear)
Pathway
pcox04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
137745863
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
137745863
NCBI-ProteinID:
XP_068341996
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Position
9:complement(4096403..4101932)
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AA seq
1123 aa
AA seq
DB search
MSSSRPSNSSSNPGRSRHSARIIAQTTVDAKIHADFEESGSSFDYSNSVRIGSSVGGDQQ
PRSDKVTTAYLHNIQKGKTIQPFGCLLALDEKTFKVIAYSANAPEMLTTVSHAVPSVGDS
PVLGLGTDIRTIFTAPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAITHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQALPSGSMERLCDTMVQEVFELTGYDRVM
TYKFHDDDHGEVVSELTKPGLEPYLGLHYPSTDIPQAARFLFMKNKVRMIVDCGAKHVKV
FQDEKLPLDLTLCGSTLRAPHSCHLEYMKNMNSIASLVMAVVVNEGDDEVRDPDSVPPQK
RKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEIEMEDQMVEKNILRTQTLLC
DMLLRDAPLGIMSQSPNVMDLVKCDGAALLYKNKVWRLGMTLSDFQLHDIASWLSEYHMD
STGLSTDSLYDAGFPGALALGDVVCGMAAVWITSKDVLFWFRSHTAAEIRWGGAKHETGE
KDDGSKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVETTLEANTKAI
NVRLSDLKLEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIDELTGLPVDEA
IGKHLLTLVEDSSTSVVKKMLDSALHGKEEQNIQFEIKTHGSRADLGPISLVVNACASRD
IRENVVGVCFVAQDITGQKNVMDKFTRIEGDYKAIVQNPSPLIPPIFGTDEFGWCSEWNS
AMTKLTGWKREEVMDKMLLGEVFGINMACCPLKSQESFVNLGIVLNHAMIGQVSEKVPFG
FCARSGKHIECLLCLSKKLNSEGSVTGVFCFLQLASPELQQALHVQRLSEQTAVKRLKEL
SYIRRQIRNPLAGIIFSRKMMEDTELGAEHQQLLHTSAQCQHQLNKILDDSDLDTIIDGY
LDLEMVEFTLHEVLNAAVSQVMIKSNAKSIRIVHNAAEDIMTETLYGDSLRLQQIVADFL
VVSVSFMPTGGQLTIEAKLTKDQLGQSVQLVHLELRITHAGGGIPEGLLNQMFGNNGDIS
EEGISLLISSKLVKLMNGEVRYLREEGKSTFMISVELAVANKM
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttctagacctagtaactcatcaagcaatccagggcggtctagacacagcgct
agaatcattgctcagacaactgttgatgcaaagattcatgctgattttgaggaatcgggt
agttcctttgactactcgaattcagtgcgtatcggcagttcagttggtggagatcaacaa
cctaggtccgacaaagtgaccactgcttatctccataacatacagaaaggcaagacgatc
caaccgtttggatgcttgctagccttggatgagaagactttcaaggtcattgcatacagt
gcgaatgctcctgaaatgctgaccacggtcagtcatgcagtcccaagcgttggggactcc
cctgtccttggcctaggaacagatataagaacaattttcactgcccctagtgcctccgca
ctgcataaggccctcggatttggagaggtttctctcttaaatcccatcttagttcattgc
aagacctctggcaagcctttctatgcaataactcatcgagtaacgggcagtttgatcatt
gactttgagccggtgaagccttatgaagtgcctatgactgctgctggggcgctgcaatca
tacaagcttgctgccaaagcaattgccagattgcaagctttgcctagcgggagcatggag
aggctttgtgatacaatggtccaagaggtttttgaactcaccggttatgacagggtgatg
acttataaatttcatgatgatgatcatggagaagtggtctctgagcttacgaagcctggc
ctggagccatatctagggttgcattatccatccactgacatacctcaggctgcacggttc
ctatttatgaagaataaggtccgcatgattgtcgattgtggtgcgaaacatgtgaaggtg
tttcaagatgagaagcttccgctggatctcacattgtgcggttcaaccctgagagcccca
cacagttgccatttggaatatatgaagaatatgaattccatcgcatctcttgttatggca
gtagttgttaatgagggggatgacgaggtgagagatcctgattctgttccgcctcaaaaa
agaaagagactttggggtttggtagtatgccataatacaagtccaagatttgttcctttc
cctctcaggtatgcctgtgagtttttaactcaagtgtttgccatccatgtcaataaggag
atagagatggaagatcagatggttgagaagaacatcctgcgcacccaaacgctgttgtgt
gatatgctgttacgagatgcacccttaggtattatgtcacagagccctaatgttatggat
ctagtgaaatgtgatggagctgccctattgtacaagaacaaggtatggagacttggaatg
actctgagtgactttcagcttcatgacatagcttcatggctctccgagtaccatatggat
tctacgggtttgagtacagatagcttgtatgatgcaggattccctggggctcttgctctt
ggtgatgtagtatgtggaatggcagctgtgtggataacttccaaggacgtgctcttttgg
tttcgatcccacactgctgcggaaattcgatggggtggtgcaaaacatgaaaccggtgag
aaagatgatggttctaaaatgcaccctagatcatcattcaaggctttccttgaagttgtc
aagacgaggagcttgccttggaaggactatgaaatggatgcaattcattctttgcagctt
attctgaggaatgctttcaaagatgtcgaaaccaccttggaagcaaacaccaaagcaatc
aatgtaaggcttagtgacctcaaacttgaagggatgcaagaactggaagctgtgacaagt
gagatggtccgtttaattgaaacagccacagttccaattttggctgttgatgttgatggg
ctggttaatgggtggaatacaaaaatcgatgagttaactggtcttcctgttgatgaagca
attggaaagcatttgctcacactcgtggaggattcttcgactagcgtggtgaagaaaatg
ttggactcagcattgcatggcaaagaggaacaaaacatccaattcgagataaaaacacat
ggttctagggctgatcttggtcccatcagcttagttgtgaatgcttgtgcaagtagagac
attcgggaaaatgttgtgggggtgtgttttgtggcacaggatatcactggtcagaagaat
gtgatggacaaattcacccggatcgagggtgattacaaagcaattgtacaaaaccctagc
cccttgattcccccaatatttggtacagatgaatttggctggtgttctgagtggaattca
gcaatgacaaagttaacagggtggaaacgagaggaggtaatggataaaatgcttctggga
gaggtttttgggatcaacatggcatgttgtcctctcaagagccaagaatctttcgtaaat
cttggtattgtacttaaccatgccatgataggtcaggtgtctgaaaaggttccctttggt
ttctgtgctcgtagtggaaaacacatagaatgcctgctgtgcttgagtaagaaattgaac
agtgagggctcagtcactggggtcttttgcttcttgcagcttgctagcccagagctgcaa
caagcacttcatgtccagcgcttatcagaacaaactgctgtgaagagattgaaggaattg
tcttatattagaaggcagatccggaatcctttagccggtataatattttctcggaaaatg
atggaggatactgagttgggagcagaacatcaacagcttctgcatacgagcgcccagtgc
cagcaccagctcaacaaaatactggatgattcagatcttgataccatcattgacggctac
ctggacctggagatggtcgagtttacattgcatgaagtactaaatgccgcagtcagtcaa
gtcatgattaagagcaatgccaagagcatccgcattgtccacaatgcagcggaagatatc
atgactgagacgttatatggggatagtcttaggcttcaacaaatcgtagctgatttctta
gtggtatcagtaagttttatgccaactggaggccagcttactatcgaagctaagttgacc
aaagatcagttaggacaatccgttcagctcgtgcatttggagctcaggatcacacacgcc
ggtggtgggattccagaaggattgctgaaccagatgtttggaaacaacggagacatatct
gaggagggcattagcctgctcatcagcagtaaacttgtgaagctcatgaatggagaagta
cggtatcttagggaagaaggcaagtcaaccttcatgatatccgtagaactcgccgtggca
aacaagatgtaa
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integrated database retrieval system
