Pyrus communis (pear): 137745969
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Entry
137745969 CDS
T10779
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pcox Pyrus communis (pear)
Brite
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137745969
microRNA pathway
RISC loading complex
137745969
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GFIT
Other DBs
NCBI-GeneID:
137745969
NCBI-ProteinID:
XP_068342103
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Position
9:complement(19176606..19181053)
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AA seq
795 aa
AA seq
DB search
MDKDVTRNKSVDPLVVEEAIQELGREPSDDEQPRYVPIELVKPPCSNDASVMYHCYLIEL
KPNFDCDIPVSDIVLGTRNELDCDTIANMNFELQVQGGPLTVNFKHAGDVSLSSEQVLAC
RRFQITIFKILVDCKLKKLDEVLERFCLGQNHRTELIDYLLLPVERIHQRPSIIDLESIM
SMSSLCNDDSKNSACVNFPQPNNNSHVLLRTQNGMVCTCRIQNSVVYMPHNNILYCITGL
LDDLNGNSLMKDNKSLTYKAHYEAKHGINLCFDQQLLLNGRHIFRVQNYLLKCRQQTKKE
SSAKSVELPPELCAIIMSPISTSNLYSFSLVPSIMHRLESLLLSVNLKHMILDHCPQNIT
VPTIKVLESITTKGCQENFNLESLETLGDSFLKYAASQQLFKTYQNDREGLLSVNKEKII
SNLSLGKLGCDRKISGFIREESFDPKKWTIPGDYSGNYFLNEELLFNKRSIYVGGTRKID
TKGVGDVVEALIGAFLRTGGELGAIYFMNWVGIEVDLDHIRYERHLQVQPEKLIDVGHLE
SLLDYKFCDPSLLVEALSHGSYMPGGYQRLEFLGDAVLDYMITAYFYYTYPGMMSPRFLT
DMRSASVNNDCYARSAVKAGLHEHILASDIVHRNIDSTVNNFGLLSTESTFGFESETSFT
TVLGDIVEALAGAIFVDSGYDKQIVFQSIRRLLEPLVSPETLRLHPGRDFNDYCQKKHYN
VQKLVQCFQNGEAMVTIEVEAEGVTYKHTSTASNKITARKLAQKKVLRSLKETTETSLKD
FPADIQLQRHCEFTC
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggataaagacgtaacccggaataaatctgttgatcctcttgtggtggaagaagccata
caagaacttgggcgtgaaccatctgatgatgaacaaccccgttatgtcccaatcgagctg
gtcaaacctccgtgttcaaatgatgctagtgtaatgtatcattgctacttaattgagctg
aaaccgaattttgattgcgatattccagttagtgatatcgtacttggcacgaggaatgaa
cttgattgtgatactattgcaaatatgaattttgaattacaagttcaagggggtccttta
acagtaaactttaaacatgctggagatgttagtctaagttcagagcaggttcttgcgtgc
agaaggttccaaatcacaatttttaagattctagtggattgcaaattgaaaaagttggat
gaagttttagaaagattttgtttgggacaaaaccatcggactgaattgattgattacctt
ttgctaccggtagaaaggatacaccagagaccatcaatcattgatttggaaagcattatg
tctatgtcgtctctctgtaacgatgattctaagaatagtgcttgtgtaaattttccccaa
cccaacaacaattcccatgttctgctacgtacccaaaatggtatggtttgtacttgcagg
atccagaattctgtggtctatatgcctcataacaatatcctgtattgcatcactggtctg
ttggatgacttgaatggaaactcactgatgaaggacaacaaatctcttacctacaaagcc
cactatgaagcaaagcatgggatcaacctgtgtttcgatcaacagttattgttgaatggg
agacacatttttcgggtacaaaattatcttctgaagtgccgacaacagaccaaaaaagaa
tcaagtgctaaatctgttgaattgccgcctgaactttgtgctataatcatgtcacctata
tcaaccagcaatttatattcattctcacttgttccgtccatcatgcatcggcttgagtct
ttactactctctgtcaacttgaaacacatgattttggatcattgccctcaaaatattact
gtcccaaccatcaaggtcctggaatctattaccacaaaaggttgccaagagaacttcaat
ttggaatccttggaaactcttggagattcctttcttaagtatgctgcaagtcagcagctt
tttaaaacctatcaaaatgatcgtgagggcctccttagtgtaaataaggaaaaaataatt
tctaatctttcccttggcaagcttggatgtgaccgtaaaatttcgggttttattcgtgag
gagagttttgatccgaaaaagtggactatacctggagattattctggaaattatttctta
aatgaggagttgctttttaataaaagaagcatttacgttgggggaacaaggaagatcgat
actaaaggtgttggagatgtagttgaggcactaatcggtgcatttcttagaacaggtggt
gaactcggtgccatatatttcatgaactgggttggtatagaggtggatttagaccacata
cgatatgagaggcacttacaagtgcagccggagaagctcattgatgtcggacatttagag
tcattgcttgactacaaattttgtgatccttctcttctcgtggaagcgctaagccatggt
tcttacatgccaggaggttaccagcggctagaatttcttggtgatgcggtgttggattat
atgatcactgcttatttttactatacgtatcctgggatgatgtcgccacgatttttaact
gatatgaggtctgcttctgtgaacaacgattgttatgcacgatctgctgtgaaggctgga
ttacacgagcacattcttgcttcggacatagtccaccgaaatattgactctactgttaac
aattttggattgctatctacagaatcaacttttggatttgaatctgagacatccttcacc
actgtacttggggatattgttgaggctttagcgggagcaatttttgttgattctggatac
gataaacaaattgtctttcagagtatacgtcgtctcttagagcccttggtttctccagaa
acgttgaggctccatcctggaagagatttcaacgattattgccaaaaaaagcattataat
gtgcagaaacttgtccagtgcttccaaaatggtgaagctatggttacaatagaggttgaa
gcggaaggggtcacatacaagcatacatcaactgcttctaataagataactgcacgtaaa
ttagctcaaaaaaaagttttgaggtctctgaaggaaactacagaaacaagtttgaaggat
tttccagcggacatacagcttcaaagacattgtgaatttacatgctaa
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