| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
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| KO |
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| Organism |
pcox Pyrus communis (pear)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pcox00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137746208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pcox03019]
137746208
03012 Translation factors [BR:pcox03012]
137746208
Enzymes [BR:pcox01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137746208
Messenger RNA biogenesis [BR:pcox03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137746208
Translation factors [BR:pcox03012]
Eukaryotic type
Initiation factors
Initiation associated factors
137746208
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:23824199..23831081
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| AA seq |
1043 aa
MSVRFLLGATTSCPLPRHLLAAPKIFAFRPGISTLAMSGRTNFQGGRRGGPNSGGGRRGR
GGGGRGGGGRGGGGGGGRGGEQRWWDPVWRAERLRQQAVQMEVLDETEWWGKMEQMKNGA
EQEMVIKRNFSRNDQQILYDMAYQLGLYFHAYNKGKALVVSKVPLPDYRADLDERHGSTQ
KEIKMSTETANRVGSLLHSSPSQGEISVNGPSGSGQGNRQTSASVITSKPVAQLEPDNVN
EKEKLSLQLKEKQEKMKVSNSLKAMQSFREKLPAFKMKSEFLKAVSENQVLVVSGETGCG
KTTQLPQFILENEISRLHGADCNIICTQPRRISAVSVAARISSERGENLGETVGYQIRLE
SKRSAQTRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFLLIILRDLLPRRP
DLRLILMSATINADLFSRYFGNSPTIHIPGLTFPVAELFLEDILEKTRYAVKSEFDNFEG
GNSRRRRQQDSKKDPLTELFEDADIDVQFKNYSTATRKSLEAWSGSQLDLGLVEATIEHI
CRNERDGAILVFLTGWDDISKLLDKIKGNRFLGDPTKYMVLPLHGSMPTVNQREIFDRPP
PNKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRG
RAGRVQPGVCYRLYPKMIHDAMLQYQLPEILRTPLQELCLHIKSLQLGAVGSFLAKALQP
PDSLAVQNAIELLKTIGALDDTEELTPLGRHLCTLPLDPNIGKMLLMGSIFQCLNPALTI
AAALAHRDPFILPINKKEDADAAKRSFAGDSFSDHIALVKAFEGWKEAKQNGAGAGKSFC
WENFLSPVTLQMMEDMRIQFLDLLSNIGFLDKSRGANAYNQYSHDLEMVCAVLCAGLYPN
VVQCKRRGKRTAFYTKEVGKVDIHPASVNAGVHLFPLPYMVYSEKVKTTSIYIRDSTNLS
DYALLLFGGSLIPSKTGEGIEMLGGYLHFSASKSVLELIRKLRGELDKLLNRKIDNPGLD
ISSEGKAVVSAVVELLHSQNIQY |
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| NT seq |
3132 nt +upstreamnt +downstreamnt
atgtcagtgcgcttcctccttggcgcaacaacaagctgcccgcttccccgacacctcctc
gccgcgcccaaaatcttcgcgtttcgccctgggatctcgacactcgccatgtccggacgc
accaacttccaaggcggtcgccgaggcggccctaactctggcggaggccgccgcggtcgc
ggtggcggcggcagaggtggaggcggtcgtggaggtggaggtggaggcggccgcggcgga
gaacagcgttggtgggacccggtatggcgcgcagagcgactgaggcagcaggccgtccag
atggaagtgcttgatgagacggaatggtggggaaagatggagcagatgaagaatggagcg
gagcaggagatggtaattaagcgtaattttagccggaatgatcagcaaattctatatgac
atggcttatcaactggggctttacttccatgcatacaataaagggaaggctttggtggtc
agcaaagttccattgccggactaccgggcagatcttgatgagcgccatggttccacacag
aaagagattaaaatgtctacagagactgccaatagagttgggagtcttttgcacagctca
ccgtcacagggggaaatatctgtcaatgggccttctgggtcagggcagggaaacagacaa
acttcagctagcgtaattacgagtaaacctgtcgcccagttagagcctgataatgttaat
gagaaagagaaactcagccttcaacttaaggagaaacaggaaaaaatgaaggtgagcaat
agtttaaaagcaatgcaatcatttcgagaaaagcttcctgctttcaaaatgaagtccgag
tttctgaaagctgtttcagaaaatcaggtcttggtagtctctggggagacaggttgcgga
aaaacaacacagcttccacaatttattctagaaaatgagatctcacgtctgcatggtgct
gactgcaacataatatgcacacaacctcgtcgtatttctgctgtatctgttgcagctcgt
atatcctctgaaaggggagagaatcttggtgaaactgttggttatcagatccgtcttgaa
tcaaagcgctctgctcaaacacgactgttattttgcactactggagtgttacttcgacag
ttggttcaagacccagaattaacgggcgtgagccacttgctggttgatgaaattcatgaa
agaggcatgaatgaggactttttactcataatcttgcgtgaccttcttcctcggcgtcca
gatctacgattaattctaatgagtgctaccatcaatgctgacttgttctccagatacttt
ggaaattccccaacaatacatataccaggattaacttttcctgtggcagagttatttcta
gaagatattctggagaaaactcgttacgctgtcaagtcagagtttgacaactttgagggg
gggaattccaggagaaggagacagcaagattccaagaaagatcctttaactgaattattt
gaggatgccgatattgatgttcagttcaaaaattacagcacagctacaagaaagtctctt
gaagcttggtctggttcacagcttgatttggggctggtggaggcgacaattgaacatata
tgtcgcaatgagagagatggagcaattcttgtattccttacgggctgggatgacatatca
aagttacttgacaaaattaagggaaatagattccttggagatcccacaaaatatatggtt
cttcccctgcatgggtcaatgcctaccgtcaatcaacgagagatatttgatcgtcctccc
cctaataaaagaaaaattgtgctggcaacaaacatagctgagagtagtatcaccatagat
gatgttgtgtatgtcatagactgcggaaaggcaaaggaaaccagttatgatgctttaaac
aagttggcttgtctattaccatcatggatttcaaaggcttcagcacatcagaggcgaggg
cgtgctggccgtgtgcaacctggagtttgttacagactatatccgaaaatgatccatgat
gcaatgctccaatatcaattacctgaaatcctccggacgccgttgcaagagctatgcctc
cacatcaaaagtttgcaacttggagctgttgggtcatttttggcaaaggcacttcagcca
ccagattctcttgcagttcaaaatgcaattgaacttctcaaaaccattggagctttagat
gacacagaggagcttaccccgcttggtcgccatctttgcacgctaccattggatccaaac
attgggaagatgcttttaatgggttctatatttcaatgcctcaatcctgctttaacaatt
gcagctgctcttgctcatcgtgacccatttatactaccaataaataagaaagaggatgct
gatgctgcaaagaggtcctttgcgggtgattctttcagcgatcacatagctcttgtgaaa
gcttttgaaggatggaaagaggcaaaacaaaatggagcgggagcaggaaagtcgttctgc
tgggagaactttttatcccctgtaacattgcagatgatggaagatatgaggatccagttt
cttgatctattatcaaatattggctttcttgacaaatccaggggtgctaatgcttacaat
caatacagccatgacttggagatggtgtgtgcggtcctgtgtgctgggctctatccgaat
gtcgttcagtgtaaaagaagaggaaagcggacagcattctatactaaagaagttggtaaa
gttgatatccatcctgcatcagtcaatgctggggttcatttattccctctcccttacatg
gtttatagtgaaaaagtgaagacaaccagcatttacatccgagactctacaaatttatca
gattatgctctacttctatttggtggtagtcttatccctagcaagaccggggagggcatt
gagatgctcggaggttaccttcatttctccgcatcaaagagtgttctagaattgattcgg
aaactgcgtggtgaactcgacaagcttttgaacaggaagattgacaacccaggattggac
atctccagcgagggaaaggcagttgtgtctgctgtggtagagttgctgcatagtcagaat
atacaatattga |
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