Pyrus communis (pear): 137746552
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Entry
137746552 CDS
T10779
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03020
RNA polymerase
pcox03420
Nucleotide excision repair
Brite
Enzymes [BR:
pcox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137746552
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137746552
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137746552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137746552
NCBI-ProteinID:
XP_068342669
LinkDB
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Position
10:complement(7102006..7110392)
Genome browser
AA seq
1820 aa
AA seq
DB search
MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI
DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK
FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI
EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR
PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL
EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
LDSLKMKKTEFDRTFTYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ
LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP
GDDQLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
AEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEV
NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA
EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY
LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP
YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSSAYSP
SSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPGSPLTSGVSPDYSPSSPQF
SPSAGYSPSQPGYSPSSTSQ
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggtttccctactcgccagccgaggtggcgaaggtgaaatgcgtgcagttc
ggcatcctcagccccgacgaaattaggcaaatgtctgtggtggagattgagcacagtgag
actatgttgggaggcaaaccgaagacggctggtttgagtgatcctcggcttggtacaatt
gaccggaagttgaaatgtgagacttgtacagccaacatggctgagtgccctggccatttt
gggcaccttgagcttgcaaaaccaatgtttcacatcggtttcatgaagattgtgttgtcc
gtgatgcgatgcgtttgcttcaattgctcgaaaattctagtcgatgaggacgaccacaag
tttaagcaagctatgagaataaagaatccgaaaagcaggctgaaaaaaattttggatgcc
tgcaaaaacaaaaccaaatgtgaaggtggtgacgaaattgatgtccaaggccaagatact
gaagagcctgtaaagaaaagtcggggtggctgtggtgctcagcagcccaagctctctatt
gagggtatgaaaatgaatgcagagtacaaagcccaaaggaagaaaaacgatgacccggaa
cagcttcctgaacccgtggaaaggaaacagaccctcactgcagaaagggttcttagtgtt
ttaaagagaataagtgatgaagactcccaaatattgggattaaacccaaagtacgctcgg
ccagattggatgattctacaagttctgcctattcctccacaacctgtgagaccctctgtt
atgatggacacctcatccaggagtgaggatgatttgactcatcaattggcaatgataatt
cgtcataatgacaatctcaggcggcaggaacgaaatggttctcctgctcatatcatttca
gagtttgcacaacttctgcaattccacattgccacttattttgacaatgagttgccagga
ctaccaagggctacgcagagatcagggaggcctattaaatcaatttgtagtagactgaag
gcaaaggaagggcgtataagaggcaacttaatggggaaacgtgttgatttttcagctcgg
acagtgattactcccgatccaaacataaacattgatcaattaggagtgccgtggagtatt
gctttgaatctcacataccctgagactgtgactccatataacattgaaaggttgaaggag
cttgttgagtatggcccccatcctccgcccggtaaaactggtgcgaagtatataataaga
gatgatgggcaaaggcttgatcttcgttatttgaagaaaagcagtgatcatcatttggag
cttggatataaggtggaacgtcatttgaatgatggagactttgtcctctttaatcgacaa
cctagtctccataaaatgtctatcatgggccacagaatcaagatcatgccatactcgaca
ttccgattgaatttgtctgtgacctcgccatataatgctgactttgacggggatgaaatg
aatatgcacgtgccccagtcctttgaaaccagggccgaagttttggagctcatgatggtg
ccaaaatgcatcgtctcacctcaggctaatcgacctgtcatgggaattgtgcaggacaca
cttttaggttgtcgtaagatcactaagagggacaccttcatagagaaggatgttttcatg
aatatcttgatgtggtgggaggattttgatggaaaggttcctgctcctgcgattttgaag
ccccggccactatggactggaaaacaggtgtttaatcttataataccaaaacaaataaat
ctccaaagaacttctgcatggcactcagaatcagagagtgggaacataactccaggggat
actcttgttagaatagaaaagggtgaattgctttctggaactctctgcaagaaggccctt
ggaacttctacaggaagtcttatccatgttatatgggaagaggttggtccagatgcagcc
cgcaagtttctgggtcatacccaatggcttgtgaattactggctgctgcagaatgctttt
agcatcggaattggagatactattgctgatgcagccacaatggagaaaatcaatgaaaca
atttccaaggcaaaaaatgaggtgaaggatcttataagtaaagcccaatccaagcagctg
gaggctgaacctggacgaaccatgatggattcgtttgaaaacaaagtgaaccaggtgttg
aatagggctcgtgatgacgctggaagtagtgctcaaaagagtttagatgagagcaacaat
cttaaggccatggttacagcagggtccaaagggagttttatcaacatatcacagatgact
gcttgtgtgggacagcagaatgttgagggtaagcgaatcccgtatgggttcatagaccgg
acgttgccccactttactaaagatgattacggaccagaaagtcgtggatttgtagaaaat
tcatatctgcgtggactaactccacaggagttcttttttcatgctatgggtggtagggaa
ggtcttatagatactgctgttaagacatctgagactgggtacatccaaaggagactggtg
aaggctatggaggatattatggtgaaatatgatggcacagtacgtaattctttaggcgat
gtcattcagtttctatatggggaagatgggatggatgctgtttggatagaatcgcaaaag
ctggattctttgaaaatgaaaaaaacagaatttgataggacttttacttatgagttggat
gatgaaaattggaatcccgactacatgttgcatgaacatgttgaggatctcaaaacgatt
agagagttccgtaatgtgtttgatgcagaagttcagaaacttgaaacagatagattacaa
ctgggaacagagattgcagtcacaggggataattcttggccactgcctgttaacttgaag
aggcttatttggaatgcacaaaaaacctttaagattgacttccgaaggacttctgatatg
catccaatggaaattgtggaagctattgacaagctccaggagagactgaaagttgttcct
ggtgatgaccagttgagtgtcgaagcgcagaagaacgcaacgttgtttttcaacatttta
cttcgcagcactttcgcaagcaaacgggtgttggatgagtacaggcttactcgtgaagca
tttgagtgggttattggggagatagaatcacgcttcctgcaatcgcttgtagcaccaggg
gaaatgattggttgtgttgctgcacagtctattggagagcctgccactcagatgacactg
aatactttccactacgctggtgtgagtgcaaagaatgttaccctaggtgtccccaggtta
agggaaattattaatgttgccaagagaatcaaaacgccatccctgtctgtctacttaaag
gctgaagctaataaaacaaaggagcgggccaagaatgtgcagtgtgctttggaatacacc
actctgcgaagtgtaactcaagctacagaagtatggtacgatccagaccccacaagcaca
gtaattgaagaggatatagattttgtgaaagcttattatgaaatgccagatgaagaggtt
aatcctgataaaatttcaccttggttgcttcgcattgagttgaatcgcgaaatgatggtg
gataagaagttgagcatggctgacattgctgagaagattaaccttgaatttgacgatgat
ttgacttgtatcttcaatgacgacaatgctgaaaaattgatccttcgtatccgtatcatg
aatgctgaagctccaaaaggggagatggttgatgaatctgctgaagatgatgtttttctg
aagaagattgagagtaacatgctgacagagatggctcttcgtggtattccagatattaac
aaagtgttcattaaacacggtaaagttaacaagttcgatcagaatgaaggatttaaagcg
gagcaagagtggatgctggataccgaaggggttaatctcttagctgttctgtgccatgat
gatgttgatgctaggcgcacaactagtaatcatttgattgaaattctggaaattctcgga
attgaggcagttcgtcggtcattgttggatgagctgagggttgttatatcgtttgatggg
tcctatgttaattatcggcatctcgctatcctttgtgacacgatgacctaccgtgggcac
ttaatggcaataacccgtcatggcattaatagaaatgacactggtcctatgatgaggtgc
tcctttgaagagactgttgatattcttcttgatgctgcagtgttcgcagagacggattat
ttaagaggtgtgacagaaaatataatgttaggacaacttgcaccaattggaacaggagat
tgtgccctgtatctcaatgatgagatgctgaagaatgccattgagctgcagctgcccagt
tacatggatggtcttgattttggtatgacaccgtctcgttctccagtgtcaggaacacca
tatcacgagggcatgatgtcccctaattatttgttgagcccgaatcttcggttgtcgcca
atttcagatgctcagttttctccatatgttggaggaatggcattctctcctacttcctct
ccaggctacagcccatcatcccctggatacagcccttcctcgcccggatacagccccact
tctcctgggtacagtcccacctcaccagggtatagccccacttctcctgggtacagtccc
acctctccgacatatagtcctagttctcccggctatagtcccaccagtccagcttactct
cctacgagcccatcatactcgccaacctctcccagctacagccccacctcaccaagctac
agtcccacctcaccaagctacagccccacttcccctgcttacagccccacttcccccgct
tacagccccacttcccccgcatatagccccacttccccatcgtacagtcccacgtctcct
tcatacagcccaacttcgccttcctacagcccaacttcaccctcctacagcccaacttct
ccctcctacagccccacatctccatcctacagccctacctcgccagcctacagcccaact
tctcctggttacagcccaacctcgcccagttatagtccaacctcgcccagttacagcccc
acatctccaagctataatcctcagtctgccaagtacagtccatcatcagcttactctcca
agcagtccaagattgtcaccatctagtccatacagtcctacctctccgaactacagccca
acctcaccatcatattcacccacatctccatcgtactctccctcaagccccacatacagt
ccgggcagccctttgacttctggagtgagcccagactatagcccgagttcccctcagttt
agtccaagtgctggatactcacctagtcaaccaggttactcgccatcatctactagccag
tag
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integrated database retrieval system
