KEGG   Pyrus communis (pear): 137746655
Entry
137746655         CDS       T10779                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    137746655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcox03019]
    137746655
   03036 Chromosome and associated proteins [BR:pcox03036]
    137746655
Messenger RNA biogenesis [BR:pcox03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     137746655
Chromosome and associated proteins [BR:pcox03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    137746655
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th NBCH_WD40 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 137746655
NCBI-ProteinID: XP_068342763
LinkDB
Position
1:41003443..41008996
AA seq 347 aa
MSNFMAASNQNQNPNKSFEVTHLPNDSISSLSFSPKSNILVATSWDNQVRCWEIHQSGQN
LASVPKASISHDQPVLCSAWKDDGSTVFSGSCDKQVKMWPLAGNQPVTVAMHDAPIKEVS
WIPEMNYLVTGSWDKTLKYWDLRQQTPIHTQALPERCYTLSVRYPLMVVGTADRNLIVFN
LQTPQTEFKRIVSPLKYQTRSVAAFPDQQGFLVGSIEGRVGVHHLDDGLQSKNFTFKCHR
EGNDIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMARCSQSIPCSAFNSDGS
IFAYAVCYDWSNGAENHNPATAKNCIYLHVPQEAEVKGKPRINTGKR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtcgaatttcatggctgcttcgaatcagaatcagaatccgaacaagtcctttgaggtc
acccatcttcctaacgactcgatatcgagcctaagcttcagtcccaagagcaacattctg
gtcgccacctcctgggacaaccaggtgcgatgctgggagatacaccagagtggacaaaat
cttgctagtgtgcccaaggcatccatatcccatgaccaaccggttttgtgctcagcttgg
aaggatgatggatctactgtgttctctggaagctgtgacaagcaagttaagatgtggcct
ttagctggtaaccaaccggtgaccgttgccatgcacgatgcaccaataaaagaggtttct
tggatcccggagatgaactacttagtcacaggaagctgggacaagactctgaagtattgg
gatctgaggcagcaaactccaatccatacccaagctctacctgagcgctgctacactcta
tcagtgagataccctctaatggttgttggcactgcagaccgaaatctgattgtttttaac
ttgcaaaccccacagactgaattcaagagaattgtttcacccctaaagtatcaaacaagg
tctgttgcagcatttccggatcagcaaggattcttggttggctctattgaagggagggtt
ggtgtacatcatcttgatgatggactacaaagtaaaaactttaccttcaagtgccataga
gagggcaatgacatctactcagtcaactctctgaacttccatcccgtacatcacacattt
gctactgctggttctgacggttctttcaatttttgggataaggatagcaaacagagacta
aaggcaatggcgaggtgcagtcaatctataccttgcagtgctttcaacagtgatggttcc
atatttgcatacgcagtttgctatgattggagcaatggtgctgaaaatcacaatcctgct
actgcaaagaactgcatttacctccatgtgccacaggaagctgaggttaaaggcaagcca
agaatcaacaccggaaaacggtga

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