Pyrus communis (pear): 137747233
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Entry
137747233 CDS
T10779
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137747233
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcox01009
]
137747233
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137747233
Protein phosphatases and associated proteins [BR:
pcox01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137747233
Spliceosome [BR:
pcox03041
]
Common components
Common spliceosomal components
SR proteins
137747233
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
NMT_C
Motif
Other DBs
NCBI-GeneID:
137747233
NCBI-ProteinID:
XP_068343404
LinkDB
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Position
10:complement(7078577..7081884)
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AA seq
246 aa
AA seq
DB search
MADSPRKKYSRSPSPWRAQSRSRSRSRSWSRPRSRSRSWSRPPRQRSRSRSRGRSRSRSP
GRSAAINPGNTLYVTGLSTRVSEKDVERHFSKEGKVASCFLVMEPRTRISRGFAFVTMDS
FEDAERCIKHLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKNTRDHGYRGDRGRDRER
ERDRGRYRGGSGRDDYGYRRSPRRSPYRGGRDYSPRGGSPYGGRSRRERSYSPYGSPERK
YARGSR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctccacgcaaaaagtattctcgatccccttctccatggagagctcagtcc
aggtccaggtctaggtctaggtcttggtctaggcctcgatcaaggtcgagatcatggtct
aggccaccaaggcagaggtctcgctctagaagtcgtggcagatcaaggtccagaagtcct
ggcaggtctgctgctataaatcctggaaatacactgtatgttactggcctatctacaagg
gtctcagagaaggatgttgaaaggcacttttcaaaggagggaaaggtggcttcatgcttt
cttgttatggaacctaggactcggatttctcgtggttttgcctttgttacaatggactct
tttgaagatgctgaacgctgcattaaacatctcaaccagtcagttctggaaggtcgatac
ataactgttgagaggtctcggaggaagcgaccaagaacgccaacacctgggcattatctt
gggctgaaaaatactagagaccatggctaccgaggtgaccgtggtcgagatcgtgaacgt
gaacgtgatcgcggtaggtaccgtgggggctcaggtcgtgatgactatggatatcggagg
tcaccaaggcgctcaccctatagaggtggccgcgattattctcctaggggcggctcacct
tatggcggaagatcaagaagagagaggtcttattctccatatggcagcccggagaggaag
tatgcccgcggctccagatga
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