Pyrus communis (pear): 137747963
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Entry
137747963 CDS
T10779
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
pcox Pyrus communis (pear)
Pathway
pcox03030
DNA replication
pcox03410
Base excision repair
pcox03420
Nucleotide excision repair
pcox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137747963
03410 Base excision repair
137747963
03420 Nucleotide excision repair
137747963
03430 Mismatch repair
137747963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcox03032
]
137747963
03036 Chromosome and associated proteins [BR:
pcox03036
]
137747963
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137747963
DNA replication proteins [BR:
pcox03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137747963
DNA Replication Termination Factors
ELG1-RFC complex
137747963
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137747963
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137747963
Check point factors
HRAD17(Rad24)-RFC complex
137747963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
AAA_lid_RFC1
UFD1_N1
COMPASS-Shg1
RsgA_GTPase
RuvB_N
Motif
Other DBs
NCBI-GeneID:
137747963
NCBI-ProteinID:
XP_068344185
LinkDB
All DBs
Position
10:20232671..20235929
Genome browser
AA seq
640 aa
AA seq
DB search
MPSPSIISRSSSFPRLKKAWPSQYTLPENLPPANHSACTAPASKITSAKLSWRRKFRKLI
RKRRNSNFTEQSLEAHNNAHIVKDVNKLHKRVEQVSLQDYCNFEIDEERSSKYSPYYIRG
LTYPNFVVPKHPISTPGRESHTSHGSWNSISTFFSGFKMREWSSCIGSKSKSNKLRPEMY
TAMKPLKPPVVNFSSSTITELSLVEKESREMKVVRTSSNESNKEKPLRKRVRSGGAAAAD
VDAPRNDQIKVMSEAEKEYAWADKYQPLCLEDFICNRDKATQLQALAKEGGCGHFIFEGP
PGVGKRTMIWAMLREVFGRDTIHAREEFKAFNLKGEMVGSIEVHVKQSPQHVEVNLSELK
GYEKHVIVELMKETQDNTLNKSMPCSLDNCRAIILYEADKLSTDALLYIKWLLERYKGCN
KIFFCCSDVSKLQAIKSLCTIFELSPPSKTEIVEVLKFISKKEGINLPHELAERLAQNSK
NNIRLAIRSFEATWKKSYPFKEDQVILTGWEDNIADIAKNMIEEQSPKQLYIIRGKLHNL
IVHGVSPEFIFKSLVAELKKYVDGSLRVDSMYDEYNRNDEYMFESDKALALSRHDHGETD
KRPAEQSIDGNVILSYCLWQHKMLILLDYESGSLFGLIQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcccgtcaatcatctcccgctcttcgtccttcccacggctcaaaaaagcatgg
ccttcgcagtacactctcccggaaaacctccctcctgcgaaccactctgcatgcacagct
cctgcgtcgaagatcacttctgccaagctttcctggagaaggaagttcagaaaacttatc
aggaagagacggaattcgaacttcacagagcaaagcctcgaggctcacaataacgcgcac
attgtgaaagatgtgaacaagcttcacaagagagtagagcaagttagtcttcaagactat
tgtaactttgagattgatgaggaaagaagctcaaaatatagtccctattacattagggga
ctcacgtatccgaacttcgttgtccctaagcatccaattagtactcccgggcgtgaaagc
catacctctcatggttcttggaactcaatctccaccttcttttcggggttcaaaatgcga
gagtggagctcttgcattggttcaaaaagcaagagcaacaagcttaggccggaaatgtac
accgcaatgaaacccctcaaaccacctgtagttaacttctcatcatcgacaattacagag
ctttctttggtggagaaggagagcagagagatgaaggtggtcaggactagtagcaacgaa
tctaacaaagagaagccattgaggaaaagagtgcgatcaggaggagcagcagcagctgat
gttgatgcgccgagaaatgatcaaattaaggtgatgagtgaagccgagaaggagtatgca
tgggcagacaagtaccagcctctgtgcttagaagatttcatatgcaatagagacaaagca
actcagctgcaggctttggccaaagaaggaggatgtggacatttcatatttgaaggaccg
ccaggagtggggaagagaacgatgatctgggctatgcttcgagaggtttttggacgcgac
acaatacatgccagagaagagttcaaggcattcaacctcaagggtgaaatggtaggtagt
atagaagtacatgtaaagcaatctcctcaacatgtagaagtgaatctctctgaactgaag
ggctatgaaaagcatgtgattgtcgaactcatgaaggaaacacaggacaacacgctgaac
aaatctatgccgtgcagccttgacaactgccgagcaataatattatacgaggcagacaag
ctatcaaccgatgccctgctgtatataaagtggcttttagaaaggtataaagggtgtaat
aagatattcttctgctgctctgatgtctcaaagcttcaggcaatcaaatcactttgcacc
atctttgagctttcacctccttcgaagactgagattgttgaagttttaaaattcatatct
aaaaaagaaggcataaatttgccacatgaattggctgaaaggttagcccaaaattctaag
aataatatccgtctagccattcgttcattcgaggctacttggaagaaaagctatcctttt
aaagaagatcaagtaattttgacaggttgggaagataatattgcagatattgccaagaat
atgattgaagagcaaagcccaaaacagctatatataatccgcggaaagcttcataatctt
atagttcatggcgtatctcccgaattcattttcaaatccctagtagcagagctgaagaag
tatgtggacggcagcctgcgagttgacagcatgtacgacgaatacaataggaacgacgaa
tatatgtttgagagtgacaaagcactggcactcagtcggcacgatcacggggaaacggat
aaaaggcccgccgaacaatctattgacggaaatgttatattgtcatactgcttgtggcaa
cataagatgcttatattactagattatgaatctggatcattgtttgggttgattcagatt
tga
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