| Entry |
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| Name |
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like
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| KO |
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| Organism |
pcox Pyrus communis (pear)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pcox00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137748072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:pcox03041]
137748072
Enzymes [BR:pcox01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137748072
Spliceosome [BR:pcox03041]
Complex C
Other components
Step II factors
137748072
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(23757507..23764074)
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| AA seq |
1718 aa
MRSSYPRTTSRQPQPSGIPRRLPPPSYPPNNFYRQTPPPSRTSFIVELLADHRSLRKHEI
DAVIANCKARPERVEVSPASRIVASLFYTQWVDALEALVYFWESRLDRFHDLIPKLNRIV
SVASDLDELRDRLKALFSGRIKKLMDGEAVKKWEAKRVWLCNDNERVSKLLRRHNHLWSF
SELNETLKRNRSEIQLVESRIREFKSAMNCLLDYLEGKGAEESGEEGVKVFKFSSEVYDW
SQIHSLIVRECRRLEEGLPIYAYRQQILQQILTQQVMVLIGETGSGKSTQLVQFLADSGI
AAEQSIVCTQPRKIAAMSLSQRVREECNGCYRGKSVSCNSTFLSGQQLVSKVTFMTDHYL
LQHYMSDTKMSGISCIIVDEAHERSLNTDLLLALLKDLLGRRSSLRLIIMSATADANVLS
EYFYHCGIFYVLGRSFRVDVRYVPSFTEGTSSDASYVSDVMRVATDVHRKEKEGTILAFL
TSQLEVEWCCDKFIAPHAIALPLHGKLSYEDQFNVFQNYPGKRKIIFATNLAETSLTIPG
VKYVIDSGMAKESKFEPGSGMNVLRVCMISQSSANQRSGRAGRTEPGVCYRLYSEYDFEA
MPPCQEPEIRRVHLGVAVLRILALGVKNLHDFKFIDAPSSEAIDLAIRNLVQLGAVKQKN
GVFELTQEGRCLVKLGVEPRLGKLILGCCDLNLRMEGLVLAAVMANSRSIFCRVGNDEEK
LRSDCIKVKFCHRDGDLFTLLSVYKEWDSLSRDERNVWCWENSINAKTMRRCQDTVMELE
SCLKHELHMIISGTWCWDPRESNDCDKHLKKVILSSLADNVAMFSGYDQLGYEVALTGQH
VRLHPSCSLLVFGEKPSWVVFGEILSVSNQYLVCVTSFDFKSLSALYPPPSFDVSKMESR
KLQLKVLTGFGITVLKRFCGKANSYLLHLVSRIRTICEDELINIKVGYYQNEIMLFATSN
NMDRVESFVNNALECEKKWMRNECLEKCLYHSSGVLPPVALFGAGAEIKHLELHKRCLTF
NVIHSKLDSEDDKELLSELEKSISGGICAIHKFPSTGQESVDKGKWVRVTFQTPEAAQKA
AELNESEFSGSILKVIPSQVDHKIFSFPAVRAKVYWPRRLSKGFAIVKCHMNDIYPIIDD
FSNLEVGGKKIRCEISKKRDMDAIVIYGLSKDLSEAEILDVLRTATRRQILDFFLLRGDA
VGNPPCSFCEEALLKEISPFMPKRYSHNSCSVQVFEPEPKRVFMRALITFDGRLHLEAAR
ALEELEGKVLPGFLPWQKIKCQQLFHSSLSCPAPVYLVIKKQLDTLLSSFIHLNGVECSL
DRNANGSYRVKISATATKVVAELRRRVEELVKGKTIDHASLTPAVLQLLFSRDGISLMHA
LQRETGTYILFDRRSLSVQVFGSSDQVGVVEKKLVDSLLTLHDNKLLEIRLQGHTLPPEL
MKEVVNRFGPDLRGLKEKIPGADFGLNVRRQVISIHGSKDVKQKVEESIYEIVQTSGSST
QRFKSDVDCPICMCEIEDEYRLEDCGHLFCRSCLVEQCESAIKNQDSFPMFCAHEGCRSL
ILFIDLKSLLSNEKLEELFRASLGAFVASSAGIYRFCPSPDCSSVYQVAAPGTDGEPFVC
GACYAETCTRCHLEHHPYLSCEQYREFKEDPDSSLKQWCKGKEHVKSCPVCRYTIEKIDG
CNHIECRCGKHICWACLEYYATSDECYTHLRTIHLAII |
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| NT seq |
5157 nt +upstreamnt +downstreamnt
atgagatcatcatacccgcgcactacttcccggcaacctcagccgtcgggaattccccgc
cgtttgcctccccccagttacccgcccaacaacttctaccgccaaacccctcctccctcc
cgcacaagcttcatcgtcgagctactcgccgatcaccggagtctccgaaagcatgaaatc
gacgccgtgatcgctaactgcaaggccaggcccgaacgcgttgaggtttctccagccagt
cgcatcgtggcctccttgttctacacgcaatgggtcgatgcgctagaagccctcgtttat
ttttgggagtcccggctggaccggtttcatgatctcattcctaagttgaaccgaatcgtc
tctgttgcctccgatctcgacgagctccgggaccggctgaaagccctgttctccggccgg
attaagaaattgatggacggagaggcggtgaagaagtgggaggcgaagcgagtttggctg
tgcaacgacaacgaacgagtttccaagttgctccggcggcataaccatctgtggagtttc
agcgagttgaatgagacactaaagaggaacaggagcgaaattcaattggttgagagcagg
attagggagtttaagtccgccatgaattgcttgcttgattatcttgaggggaaaggggcg
gaggaatcgggtgaagaaggggtgaaggttttcaaattttcgagtgaagtttatgattgg
agtcaaattcacagcttaatagttcgggaatgccgcaggctcgaagaagggttgcccatt
tacgcttatcggcagcaaattctacagcaaattcttacccagcaggtcatggtattgatt
ggagagactggctcagggaaaagtacacagctggtgcagtttcttgccgattctggaatt
gctgccgagcagtccattgtatgcactcagcctcgaaagattgctgccatgtcgttgtcg
cagagagttagagaagaatgtaatgggtgttacagaggaaaatcagtatcttgtaattca
acatttttgtctgggcagcagttggtttcgaaggtgacatttatgacagatcactattta
ctgcagcattacatgagtgatactaagatgtctggtatttcttgcataatagtcgatgag
gctcacgaaaggagcctgaatactgatctcctgttggcattgttaaaagatttacttggt
cgacggtctagtttacgacttattataatgtctgcaacagctgatgccaatgtgctttcc
gaatatttttatcattgtggaatcttttatgtattggggaggagctttcgcgttgatgtt
agatatgtaccatctttcactgaaggaacttctagtgatgcttcctatgtttctgatgtg
atgagggtagcaacagatgtacacagaaaagagaaagaggggacgattcttgcctttttg
acttcccagttggaagtagaatggtgttgtgataagtttatagcaccacatgcaattgca
ttgcccttgcatggaaaactttcttatgaagatcaatttaatgttttccaaaactaccct
ggaaaaaggaaaatcatattcgccactaatctggctgagacatctctgacaattcctggg
gtaaagtatgtgattgattctggtatggcaaaagaaagcaaatttgaaccgggaagtggt
atgaatgttctgagagtttgtatgatcagccagagttctgctaatcaaagaagtggccgt
gctggaagaactgaaccaggagtatgttatagactttactcagaatatgactttgaggct
atgcctccttgtcaggaacctgagattcgcagagttcatcttggtgttgcagttctgagg
attctggctttaggcgtcaagaatttacatgactttaaatttattgatgcaccttcttct
gaagctattgacttggctatcaggaaccttgttcagttgggagctgttaagcaaaagaat
ggtgtttttgagttaacccaggaaggtcggtgcttggttaaattgggtgttgagcctcgg
cttggtaaattaattcttggttgttgtgaccttaacttgcgtatggagggtcttgttctt
gcagctgtaatggcaaattcccgcagcatattttgtagagttggtaatgatgaagaaaag
cttagatcagactgcatcaaggtgaaattttgtcatcgtgatggtgacctctttaccctt
ctctctgtgtacaaggaatgggattctttgtctcgagacgagagaaatgtgtggtgctgg
gaaaacagcatcaatgccaaaacaatgaggagatgccaagacacggtgatggaattggag
tcttgccttaaacatgaactccacatgataatttctggtacctggtgttgggatccacgt
gaatcaaatgattgtgacaaacatttgaaaaaggttatactttcttcccttgcagataat
gttgctatgttctcaggttatgatcaacttggttacgaagtggcattaactgggcagcat
gttaggctgcatccttcgtgttcattgctagtatttggggagaaacctagttgggtagtg
tttggtgaaatcctgtcggtttctaatcagtatctggtgtgtgtcacttcctttgatttc
aagtctttgtctgcgctttatcctcctccttcatttgatgtatcaaagatggaaagtcga
aagcttcagctgaaagtgttgactggttttggcattactgttcttaaaagattttgtggg
aaggcaaacagttatctgcttcatctcgtgtcccgtattaggacaatttgcgaggatgaa
cttatcaacattaaagtcggttactatcagaatgagattatgttgtttgccacctcaaat
aacatggatagggttgaaagctttgtaaataatgccttggagtgtgaaaaaaaatggatg
cgtaatgaatgcttggagaaatgcttatatcacagttctggcgtcttgcctcctgtagca
ttgtttggagccggtgcagagatcaaacatctggagcttcataaaaggtgtttgacattt
aatgtaattcattcaaaactggattctgaagatgataaggagttacttagtgagcttgag
aagtctatctctggtggtatatgtgctattcacaagttccccagcactgggcaggaaagt
gttgacaaaggaaaatgggtgagggtaacatttcaaactcctgaagcggctcaaaaagca
gctgagctaaacgaatctgaatttagtggctccatactgaaggttattccttcgcaggta
gatcataaaatattttcattccccgctgttagagctaaggtttattggcctcgcaggcta
agcaaggggtttgcaatcgtcaaatgccacatgaatgatatctatcccataattgatgac
ttttctaaccttgaagttggtggaaaaaaaattcgctgtgagattagcaaaaaaagggac
atggatgctatcgtgatatatggactaagcaaagatctgtccgaggctgaaattttggac
gtgttgaggactgctacaagaaggcaaatccttgatttttttctgctgagaggagatgct
gtaggaaatccaccatgtagtttttgtgaagaagcactcttaaaagaaatatcacctttt
atgcctaagaggtattcccacaatagctgcagtgttcaggttttcgagcctgaaccaaag
agagttttcatgagagctttgattacatttgatggaagattacacttggaagcggcgaga
gctttagaagaattagaagggaaggtactgcctgggttccttccatggcaaaagataaaa
tgccagcagttgtttcatagctctctatcctgccccgcccctgtctatcttgtgatcaag
aagcagctggatactttactctcaagttttatacatctaaatggtgtagaatgcagctta
gataggaatgctaatggttcctaccgagtgaagatatctgccactgctacaaaagttgtt
gcagaactgagaagacgtgtggaagagcttgttaagggaaagactatagaccacgccagc
cttactccagctgttttacagcttcttttctctagggatggcatcagtctaatgcacgca
ctccagcgggagacaggaacctatattctttttgacagacgtagcctcagtgtacaggtc
tttggttcttcagaccaagttggtgtggtagagaagaaattggtcgattcccttttaacc
ctccatgacaataagctgcttgagatccgacttcaaggccataccttacctcccgagttg
atgaaagaggttgttaacaggtttgggccagacttacgggggctcaaagagaagatccca
ggggctgattttggtctaaatgttcgccgtcaagtaatttccatccatggaagcaaggat
gtgaagcaaaaagtagaagagagtatttatgagattgtacagacgtcaggtagttcaact
cagaggtttaagagtgatgttgattgccccatatgtatgtgtgagattgaagatgaatac
cggctcgaggactgtgggcatttattttgccgctcgtgtttagtggagcagtgcgagtcg
gcaattaagaaccaagatagtttcccaatgttttgtgcacacgagggttgcagatctctt
attttgttcattgatctgaagtctctattatcaaatgagaagctggaggagctatttagg
gcttcactgggggcgtttgttgcatcaagtgcaggtatttacaggttttgcccgtctcct
gactgctcttctgtgtatcaagtagctgctcctgggacagacggtgaaccatttgtttgt
ggtgcatgttatgccgagacatgtaccaggtgccatttagaacatcatccatacctctca
tgtgagcagtaccgggagttcaaggaagacccagattcatcgttgaagcagtggtgcaaa
ggaaaagaacatgtgaagagctgcccagtatgcaggtatacaattgagaagatagacggg
tgcaaccatatagaatgtaggtgtgggaagcacatttgctgggcctgtttggagtattat
gcaacgagcgacgaatgctatacccatttgaggactattcacctggccatcatttga |
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