Pyrus communis (pear): 137748620
Help
Entry
137748620 CDS
T10779
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137748620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137748620
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137748620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
137748620
NCBI-ProteinID:
XP_068344890
LinkDB
All DBs
Position
1:complement(13639928..13641954)
Genome browser
AA seq
221 aa
AA seq
DB search
MGDEGGSSHVSDSNSLDHHDNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLHRLKS
NYAAYGLRTCVEAVILVELFKHPHVLLLQIRNCIFKLPGGRLRPGESEIDGLKRKLSRKL
CINADGDGIPWEVGECLGVWWRHDFETLLCRDLPPRVENPKECTKLFIVKLPDCRKFIAP
KNQKLLAIPLCQIAKNNETYGPVISGVPEMLSTFTINIIDD
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgaagggggttcctcacacgtgtcagacagtaacagtcttgatcaccacgac
aacgatgatcagagccgtacgctggacatataccctctcagcagctactacttcgcttcc
aaggaagccattcctgtcaaggacgaaactccagctgatcgtcttcacagattgaagtcc
aattatgctgcttatggattgaggacttgtgtggaagcagttattctggttgagttgttc
aaacatcctcatgtgctgctcttgcaaataagaaactgcatttttaagcttcccgggggt
cgcttaagacccggcgaatcagagatcgacggattgaaacgtaagctgtcgaggaagctt
tgtatcaatgcagatggtgatgggattccttgggaggttggggagtgtcttggggtatgg
tggaggcacgacttcgaaacattgctctgtcgagacttgccgcctcgagttgaaaaccca
aaggagtgcaccaaactattcatcgtgaagttaccagattgtcggaagttcattgcgcca
aaaaaccaaaaattgctcgctattcccttgtgccagatcgccaaaaacaacgagacgtat
ggacctgttatatcaggtgttccggagatgctatcaacgtttaccatcaacattatagat
gattaa
DBGET
integrated database retrieval system
