Pyrus communis (pear): 137748751
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Entry
137748751 CDS
T10779
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137748751
09122 Translation
03013 Nucleocytoplasmic transport
137748751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137748751
03041 Spliceosome [BR:
pcox03041
]
137748751
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137748751
Spliceosome [BR:
pcox03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137748751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR41
WD40_Gbeta
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
137748751
NCBI-ProteinID:
XP_068345068
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Position
1:complement(13539736..13543329)
Genome browser
AA seq
357 aa
AA seq
DB search
MLRDFHQAQLNFLPSANKSTTMCGDATNWDEEVYRESILKEREIQTRTVFRTVWAPSLNP
SQETVVVPVTPSPASSPSSLLMAEPTCYLQAHEGPDYDVKFYGNGEDSVLLSCGDDGRIQ
GWRWKDCEELYVPLHLQGKHVKPVLDLVNPQHKGPWGALSPIPENNARAVNNEEGCIFSA
ADYSCFCCWDVERGQVKLTFKGHADYVHSVVARNSTNQIITGSEDGTARIWVESAFKHMS
HCIALDASESWLACGSGQSLSVWNLPASECISRVSTHASIQDVVFDENQVLAVGAEPLLC
RYDINGAILSQMQCVPQSAFSVSLHPSGVIAIGGYGGLVDVISQFGSHLCTFGCRCV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgctcagagattttcaccaagctcagctgaatttcctgccttccgccaacaagtcaacc
accatgtgcggtgacgcaacgaactgggacgaagaagtgtacagagaatccatattaaag
gagagggagatccaaacccgaaccgttttccgaaccgtttgggctccgtcgcttaaccct
agccaggaaaccgtcgtcgtccctgttaccccatcccctgcctcatctccaagctcgttg
ttaatggcggaacctacttgctatcttcaagcgcatgaagggcctgattacgatgttaag
ttttacggaaatggcgaagattctgttttgctgagttgcggtgacgatggacggattcaa
ggatggaggtggaaggattgcgaagaattatatgtgcctcttcatttgcaaggaaagcac
gtgaagccggtacttgaccttgtgaatcctcaacataaaggtccatggggggctttatct
ccaatccctgaaaacaatgctcgtgctgttaataacgaggagggatgcattttttctgct
gctgattattcttgcttctgttgctgggatgtggaaagaggtcaagtcaaattgactttc
aaggggcatgcagactacgtgcattctgtcgttgctcggaattctaccaatcagatcata
actggttcagaggatgggacagcacggatatgggtggaaagtgcgttcaagcatatgagc
cattgcattgctcttgatgcaagtgaaagttggttggcttgtggtagcggtcagagttta
tcagtttggaaccttcctgcttctgaatgcatttcaagggtttcaacacatgcatccata
caggatgtagtattcgacgaaaatcaagtattagcagttggagcggaacctctactttgc
cgttatgacataaatggggcaattctatcacaaatgcaatgtgttcctcagtctgccttt
tccgtctcattacatccatctggggttatcgcaataggaggttacggtggtcttgtggat
gttatatcgcagttcggaagtcacttgtgcacatttggctgccgatgtgtttaa
DBGET
integrated database retrieval system
