Pyrus communis (pear): 137748933
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Entry
137748933 CDS
T10779
Name
(RefSeq) dicer-like protein 4
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcox03036
]
137748933
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137748933
microRNA pathway
RISC loading complex
137748933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
DND1_DSRM
dsrm
PAZ
Cas3-like_C_2
SWI2_SNF2
GA-like
Motif
Other DBs
NCBI-GeneID:
137748933
NCBI-ProteinID:
XP_068345228
LinkDB
All DBs
Position
1:complement(9796799..9807805)
Genome browser
AA seq
1624 aa
AA seq
DB search
MDGAGGSFPPSDQGGSSTDRVKSGHGASKPEKDPRKDARKYQLDLCKKALEENVIVYLGT
GCGKTRIAVMLIYEMRHLIRKPQKSVCVFLAPTVALVQQQARVIEDSLGFDVGIYCGGSN
QLKYHQDWEKEIEQYEVFVMIPEVLLRNLCHCFIKMESISLLIFDECHHAQVQSNHAYAE
IMKLFYNANTTKHPRIFGMTASPVVGKGASSRENLSKCINSLESILDAKVYSVDKKELEC
FVSSPVITVYDYGPVISDASSPYITYYTKLEQMKHQCIAELGKKTNDHQSLRSTKKLLNR
MHESIRFCLENLGLWGALKASHVLLSGDHLERSELIEEEGNNGDDSLCVRYLTQVDGILT
TDCLKDSIADDLSSIDILKEPFFSRKLLRLIGVLSSFRLQQNMKCIIFVNRIVTASSLSY
ILQRLKFLASWKCDFLVGVNSRLMNMSRKKMKIILDKFRSGELNLLVATKVGEEGLDIQT
CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVNSGNQKERDLIETFRQDEAHMNMEIA
FRTSSETFVGSADRVYKVDSSGASISSGYSISLLHKYCSKLPHDEYFDPNPKFFFFDDLG
GTVCQIILPSNAPIHQIVGTQQSSMEDAKKDVCLKAIEELHKLGALNDFLLPQQDNANEV
ELVSSDSDSTEDEDPRGELHEMLVPDALKEPWSSSEDLVSLSSYYIKFNPVPEDRIYRSF
GLFVKAPLPVEAETMELDLHLAHSRSVITKLVPSGFANFGKDEIVLAQNFQEMFLKLVLD
RMKFVSDYVPLGRHDRSSSSTFYLLLPVMLGNDDKIASIDWGTIRKCLSSPVFRAPGDAT
EKVPSLDIRLASGYKSIRDIQNSLVYVPYKKSFYFITDVVREKNGYSQYKNSGTLTYVDH
LIQKFGIHLKYPEQQLLHAKPLFSLHNLLHNRRQEDSGPTQLEEYFISLPPELCELKVIG
FSKDIGSSISLLPSLMHRLENLLVAIELKHVLAASFPEGGAVTAKRVLEALTTEKCQERL
SLERLEILGDAFLKFAVGRHFFLRHGSLDEGGLTRKRSNVVNNSNLFKLAMRSNLQVYIR
DQPFEPSQFFALGRPCPRICNEETVGAIHSHDLSGDVNHTSASEVRCSKGHHWLYKKTIA
DVVEALVGAFVVDSGFIAATAFLKWIGIQVDFEPSQVTEACIASSRYIPLSACMNIAALE
NLLGYKFLHRGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ
LTDLRSVSVNNKAFANVAVDRSFHKFLISDSSSLSEAIESYVGFIETAASDRGLLDGPKC
PKALGDLVESCLGAILLDTGFNLNRVWEIMLSFLKPIMSFSSLQLSPIRELRELCQAHSW
GLEFVPTKMGKKYSVCATVNGNNVCVSASTTSLNKKDGIRICAQLIFDKLKAQGNIPMTN
SLEEVLKSSSEMEAKLIGYDETPIDVVLLDASGFDNLNVQEVSRRNFNSQGHPINQERNG
HSSCRKPVRQSPSSSGAVKMRPNKTRENSKNDANSQSGGTHTATSRSRLYEVCAANYWET
PLFECCNEEGPSHLKSFTYKAVVKIEEDPDTLLECFGEPNMKKKAAAESAAEGALWYLKN
RGFM
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgctggcggaagttttccaccgtctgatcagggcggttcgtctaccgaccgg
gtcaagtccggtcatggagcttcgaagccggagaaagacccgaggaaggacgccagaaag
tatcaattggacctgtgcaagaaagctttggaggagaacgtaattgtgtatctagggact
ggttgtgggaaaacccgcatagcggtcatgcttatatacgagatgcgccacttgatccgc
aaaccccaaaagagcgtatgcgtgtttcttgcacccacagtggctctggttcaacagcaa
gctagggttatagaagattcccttggtttcgatgttgggatttattgtggaggctctaac
caattgaagtatcaccaagactgggaaaaagagattgaacaatatgaggtttttgttatg
atccctgaagtactgctacgaaacttatgtcactgtttcattaagatggagtcaatttct
ttgttgatatttgatgaatgtcatcatgctcaagtccaaagcaaccatgcctatgcagaa
attatgaaattgttttacaatgctaataccacaaaacatcctcgtatatttggcatgacg
gcatctccagttgtagggaaaggtgcttcgagtcgggaaaacttatcaaaatgcatcaat
agtcttgaaagtatacttgatgctaaggtttattcagttgataagaaagaattggaatgt
tttgtctcatctcctgtcatcacagtgtatgattatggtccagttataagcgacgcatcc
agcccctatatcacttactacactaaacttgagcagatgaaacaccagtgtatagcagaa
cttggtaagaagacaaatgatcaccaaagtctaaggagtacaaagaaactgttgaacaga
atgcatgaaagtatacggttttgcttggaaaatcttggcctttggggagcattaaaagct
agtcatgttcttttgagtggcgatcacttggaaaggagtgaactaatagaggaggaagga
aataatggtgatgattctctatgtgttagatatctgactcaggttgatggcatccttact
actgactgcttaaaagattccattgctgatgatctatcttctatagatattttaaaggag
ccatttttctcaagaaagctcttacgtcttattggagttctttcatcctttaggttgcaa
caaaatatgaaatgcataatttttgtcaatagaattgttactgcgagttccttgtcttac
atactacaacgcctcaagtttctagcatcttggaagtgtgattttcttgtaggagtcaac
tctagactgatgaatatgtcaaggaagaagatgaaaatcattcttgataagttccgatct
ggagagttgaatctattggttgcaactaaagttggtgaagaaggactagatattcagacg
tgctgccttgtgatacgatttgatcttccagaaactgttgctagctttatacaatcacga
ggtcgtgcacggatgcctcagtctgaatatgcatttttggtaaacagtggcaaccagaaa
gagagagatttaatagaaaccttcagacaagatgaagctcacatgaacatggaaattgct
ttcagaacatccagtgagacatttgttggttcggcagatagggtgtataaagttgattct
tctggtgcttccatcagttctggatatagcatctcattgttacacaagtattgttcaaag
cttccacatgatgagtactttgaccccaatccaaaattctttttttttgatgacttgggg
ggaactgtttgtcagataattttaccttccaatgcgccaatccatcaaattgtcggaaca
caacaatcttcgatggaagatgccaaaaaagatgtttgtctaaaggccattgaagaattg
cataaattaggtgccttaaatgactttctcttaccacagcaagacaatgcaaatgaggtg
gagttggtgtcttctgattctgacagtaccgaagatgaggatccaagaggagaactacat
gaaatgctagttcctgatgcactaaaagagccatggagtagttcggaggaccttgtttcc
ctcagctcatactatataaaatttaaccctgttcctgaggacaggatctatagaagcttt
ggtctatttgtcaaggctcctctcccagttgaagccgaaacaatggaacttgatcttcat
ctcgctcatagtagatctgtgattacaaagttggtcccttcaggatttgccaattttggc
aaagatgagatcgtgctggcacaaaattttcaagaaatgttcctcaagctcgtccttgac
cgaatgaaatttgtttctgattatgttccattgggaaggcatgatagatcaagctcatca
accttctacctgttgcttccagtaatgttgggtaacgatgataagatagcaagcattgat
tgggggactatcagaaaatgtttatcatccccagtgttcagggctccaggagatgctaca
gagaaagttccttctttggatattcggcttgcatcaggttacaaaagcataagggatatt
cagaatagtttagtctatgtcccatataagaaatcattttacttcatcactgatgttgtt
cgagaaaagaatggctacagccaatataaaaactcgggcactttaacctatgtggaccat
ttaattcaaaaatttggcattcaccttaaataccctgagcaacagcttctgcatgccaaa
ccacttttctctttacacaacttgctacacaaccgaaggcaagaagattcgggaccgaca
caactagaggagtattttattagcttgccacctgagctttgcgagttgaaggtaatagga
ttttccaaagatattgggagttcaatatctttgttaccatcactcatgcaccggctggaa
aacctgcttgtcgccatcgaactgaagcatgtattagctgcttcattcccagagggaggt
gcagttactgccaagagagttctagaggcactcacaactgagaagtgccaggagcggctt
tcccttgaaaggcttgaaatacttggtgatgctttccttaagtttgctgttgggcgacac
ttcttccttcggcatggtagccttgatgaagggggactaacaaggaagcgttctaatgtg
gtaaacaattccaatttattcaagctagccatgagaagcaacttacaggtatacatacgg
gatcaaccatttgaaccctctcagttctttgctttaggccgaccttgcccaagaatttgt
aacgaggagacagtaggagctattcattctcatgacttatccggtgatgtaaatcacaca
agtgctagtgaggtcagatgcagtaagggtcaccattggttatataagaaaaccattgct
gatgttgttgaagcccttgttggagcattcgtagttgacagtggctttatagctgcaact
gcatttcttaagtggattggcatacaagtagacttcgaaccatcacaagttactgaagca
tgcatagcaagctctagatacatcccactttctgcttgcatgaacattgctgcccttgaa
aatttattagggtataagtttctccacagaggtctgctcttacaggcatttgtacatcct
tcttacaacaagcatggaggaggctgctatcagagattggagtttcttggggatgccgtc
ttggattacttgatcacctcgtacctgtattcagtttatccaaagttgaagcctggtcaa
ttaacggatttgagatcagtgtctgtgaataataaagcctttgctaatgttgcagtagat
cggtccttccacaagtttctaatcagtgattcctctagcctttcagaggcgatagaaagt
tatgtgggcttcattgaaacagctgcatcagatagaggtctgcttgatgggcccaaatgt
ccaaaggctctgggcgacttggtagagtcctgtctgggcgcaattcttcttgatacaggg
ttcaacttgaatcgtgtttgggagataatgctatcctttctgaaaccaattatgagcttt
tccagcttgcaacttagtcctattagggaactacgtgaactttgccaagctcattcatgg
ggtcttgagtttgtaccaacaaaaatgggtaaaaagtattcagtttgtgcaacagtgaat
gggaataatgtttgtgtatctgcttctacgaccagcttgaacaaaaaggatggaataaga
atttgtgcacaactgattttcgacaagttgaaggctcaaggcaacatacctatgactaac
tcattggaggaagtcttaaagtcaagcagcgagatggaagccaaacttattggatatgat
gaaacaccaatagatgttgtgcttcttgatgcaagtggatttgataacttaaatgtacaa
gaagtttcccgccgaaattttaactcccaagggcatcctatcaatcaagagagaaacggt
cactcttcctgcagaaaacctgtacgacaatccccatcttcatctggagcagtcaaaatg
cggcccaataagaccagggaaaattctaagaatgatgctaactcgcaatccggaggtaca
cacacggcaacatcaagatctcgtttgtatgaagtttgtgccgctaactactgggaaact
cccttatttgagtgctgcaatgaagaaggaccaagccacttaaaatcgttcacctacaag
gctgtagtaaagatagaagaagatccagatacgttgttagagtgcttcggagaacctaat
atgaaaaagaaagcagcagcagagagtgcggcagaaggggcactttggtacttgaaaaac
agaggttttatgtag
DBGET
integrated database retrieval system
