KEGG   Pyrus communis (pear): 137749494
Entry
137749494         CDS       T10779                                 
Name
(RefSeq) uncharacterized protein
  KO
K12828  splicing factor 3B subunit 1
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137749494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcox03041]
    137749494
   03036 Chromosome and associated proteins [BR:pcox03036]
    137749494
Spliceosome [BR:pcox03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    137749494
 Complex B
    137749494
 Complex C
   U2 SnRNP specific factors
    137749494
Chromosome and associated proteins [BR:pcox03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    137749494
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N DUF58
Other DBs
NCBI-GeneID: 137749494
NCBI-ProteinID: XP_068345695
LinkDB
Position
11:14118677..14122836
AA seq 1266 aa
MASDDEIEKTQEERKRMEKQLASLTSVTFDTDLYGGTDKGAYVSSIPVNDDDDNAEAMDN
EIARRMAASYTAPKSVLNERPRGGDADEDLGFKKPQRIIDREDDYRQRRLNRIISPERHD
PFASGEKTPDPSVRTYADVMREEALKREKDETLKLIAKKMKEKEEAPPEKEDKPAAAEAA
PQKRRNRWDQSQDGDGGGKKAKTSDWDLPDTTPGKWDATPTPGRVSDSTPSLGRRNRWDE
TPTPGRVADSDATPAGAVTPGATPAGMAWDATPKLPGMATPTPKRQRSRWDETPASMGSA
TPMAGATPAAAYTPGVTPVGGVELATPTPGAINVRGAITPEQYNLLRWEKDIEERNRPLT
DEELDAMFPQEGYKVLDPPSSYVPIRTPARKLLATPTPMGTPMYSIPEENRGQQFDVPKE
LPGGLPFMKPEDYQYFGALLNEDEEEELSPDEQKERKIMKLLLKVKNGTPQQRKTALRQL
TDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIE
PLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASAL
GIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIENGLSDENQ
KVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDA
MYASYYTKEVMVVLIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRSDILPEFFKNFW
VRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVVNL
GASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGLRVKPYLPQICGTIKW
RLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALK
AIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRI
CFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAI
VAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALM
DRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMR
VALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPMLEDEEHNVYTRP
ELMMFV
NT seq 3801 nt   +upstreamnt  +downstreamnt
atggcgtccgacgacgagatagagaagacgcaggaagagaggaagaggatggagaagcaa
ttggcctccctcacctccgtcaccttcgacacagacctctacggcggcacagacaagggc
gcatacgtctcgtcgatccctgtgaacgacgacgatgacaacgcggaggccatggacaac
gagattgctcggaggatggcggcgtcgtacacggcccccaagtcggtgttgaacgagagg
ccgagaggcggcgacgccgatgaggatttggggttcaagaagccgcagaggattatcgat
cgggaggatgattatcgacagcggaggttgaaccggatcatatcgcctgagcggcacgac
ccgtttgcgtccggggagaagactccggacccgtcggtgaggacttatgccgatgtgatg
agggaggaagccctgaagagggagaaggatgagactctgaagcttattgctaagaagatg
aaggagaaagaggaggcgccgccggaaaaggaggataagcctgctgcagcagaggcggcg
cctcaaaagaggaggaatcggtgggaccagtctcaggatggcgatggtgggggcaagaag
gcgaaaacgtcggattgggacttgcctgatacgacaccaggaaagtgggatgcgactccg
acgccagggagggtttcggattcgactccatcactggggaggaggaaccgctgggatgag
acacccactccggggcgggtggcagattcggatgctactccagctggtgctgtcactccc
ggtgccacccccgctgggatggcttgggatgcgactccgaagcttcctgggatggccaca
ccgacaccgaaacggcagaggtcaaggtgggatgagacccctgcctcaatgggcagtgcg
accccaatggctggggcaacccctgctgctgcctatacacctggtgtgacccctgtaggt
ggagttgaacttgctaccccaacccccggggctattaatgtgaggggagccattacgccg
gagcagtataatctattgaggtgggagaaggatattgaagagaggaatagaccattgact
gatgaagagctggatgctatgtttcctcaagaagggtataaagttttggacccaccgtct
tcttatgtgccgattaggactccggcgaggaagcttcttgctacccctactccaatgggg
actcctatgtattctattccggaagagaatcgtgggcagcagtttgatgtgcctaaggag
ttgcctggtgggttaccgtttatgaagcccgaggattatcaatactttggggcattgctg
aatgaagatgaggaggaggaattgtcccctgatgagcagaaagagcggaagattatgaag
cttctgcttaaagttaagaatggaacaccacagcagagaaagacagcattgaggcagctt
actgataaggctcgtgagtttggtgctggccccttgtttaaccgcattttgcctctgctt
atgcaacccactttggaagaccaagagaggcatcttttggttaaggtaattgatcgagtg
ctttataaattggatgagttagtacgtccttatgtgcataagattcttgttgttattgaa
cctttgttgattgatgaagactattatgcgcgtgttgaagggagagaaattatctccaat
cttagtaaagcagctggtttggccactatgattgcagcgatgcgtccggatattgataac
attgatgaatatgttaggaacactactgccagagcttttagtgttgttgcttctgcactt
ggtatacctgccctgttgccctttttgaaagctgtgtgtcagagcaagaagtcgtggcaa
gcacggcacactggaatcaagattgttcagcagattgccattttgatcgggtgtgctgta
cttccccacttgaggtcccttgtggaaattatagagaacggtctgagtgatgaaaatcag
aaggttcggacaattactgctctatctcttgctgctcttgctgaggcagctgccccatac
ggtattgagagctttgactctgtgttgaagccattgtggaagggtattaggtctcaccgt
ggtaaggttttggctgccttcttgaaagcaattggttttattattccccttatggatgca
atgtatgcgagttactatacaaaggaagtgatggttgttttgattagagagtttcagtct
cccgatgaagagatgaagaaaattgtgctcaaagttgtcaaacagtgtgtgagtacagaa
ggtgtagagcctgagtatataagaagtgatattcttcctgaattctttaaaaacttttgg
gttagaaggatggctttggataggagaaactacaggcaattggtggaaacaactgtagag
atagcaaacaaagtgggtgttgctgatatagttgggagaattgttgaggatctcaaagat
gagagtgaaccgtataggagaatggttatggagacaatcgagaaggtggttgtgaacttg
ggtgcatctgacattgatgctcggttggaggagcttctcattgatggtatcctttatgct
ttccaggagcagacgagtgatgatgcaaatgtgatgcttaatggtttcggtgcagttgtg
aattctcttggtctgagggtgaaaccttaccttcctcagatttgtggtaccattaagtgg
cgtttgaataacaagagtgcaaaggtcagacagcaagctgcagatcttatttcgagaatt
gctgttgtcatgaagcagtgccaagaggagcaactgatgggtcatcttggtgttgtcttg
tatgagtatttgggagaagagtatccagaagttttgggatcaattctgggagcgctgaag
gcaattgtgaatgttattggtatgacaaagatgactcctcctataaaggatttgcttccc
aggttgacaccaattttgaagaataggcatgagaaagtccaggagaactgtattgacctt
gttggtcgtattgctgatcgcggtgctgagtttgtcccagcaagggagtggatgaggatc
tgttttgagcttcttgagatgctcaaggctcataagaagggtatccggcgagctaccgtg
aatacttttggttacattgccaaagccattggtccacaagatgtcctcgcaactctattg
aacaatctcaaagtccaggagcggcagaaccgtgtctgcaccactgtggcaatcgcaata
gtagctgaaacctgttcgcctttcacagttcttccggccctgatgaatgagtatcgtgtt
ccagagcttaatgtgcagaatggtgttttgaagtccctctcgttcttgttcgagtacatt
ggtgaaatggggaaagactatatctatgcagtgaccccgttgctagaggatgccctcatg
gatagagatctggttcacagacaaactgctgcttctgctgtaaagcacatggctctggga
gtagcgggattgggatgtgaggatgctttagtccacttgctgaactacgtctggccaaac
atatttgagacatccccacacgttatcaatgcggtcatggaagcaattgaagggatgaga
gtggcattaggtgctgcggttgtactcaactactgtctccaggggctgttccatcctgct
aggaaggttagagaggtgtactggaagatttacaactcactgtatatcggagctcaagat
gctcttgttgcatcgtacccgatgcttgaggatgaggagcataacgtatataccaggccc
gagctaatgatgtttgtatga

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