Pyrus communis (pear): 137749530
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Entry
137749530 CDS
T10779
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcox03036
]
137749530
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
137749530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PHD_2
PDS5
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
137749530
NCBI-ProteinID:
XP_068345740
LinkDB
All DBs
Position
11:23152241..23164305
Genome browser
AA seq
1807 aa
AA seq
DB search
MSYPVVTSSSSSGSAHGGISLSNTVHSEVAPCLPLPSLPVFCGASDHLRLFDEPSRNSAW
LNRPDAAVASRIADLLRVTDVSYLNLREDAGAVPYVYGEPLKLHDVVLQYNPEAFEYNSP
GPIKGQVPVSSTVADKKPFKPSIPILKPSQRDYSVSDNNQLNDIPPNDISTPSSRKPKSK
KKASDVMSSVGPDSAEIQDAAIRSFCELVEEFCGRAEIISDDREETEWLSMPLSDLRVLA
NEIMSLRAKKLLHLVPVDTFVRLLRILDHQIHRAEGLSIIEYEQSNSDVVSSIQCALEAI
HAALAVMAHNQMPKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHRPSQNGSLEVEE
DEEPDAEFGSASKKRRSIKTVKVQKSSFNRVSAAVNNILQKMCTILGLLKDLLLIERLSD
GCILQLVKTCFTTFMVDNIQLLQLKAMGLISGIFYSYTQHRTYVIDELIQLLWKLPVSKR
ALRAYHLPDEEQRQIQMITALLIQLVHYSANLPESLRQESSSNSILELSVNADYPTKGHE
AATEACCHFWTRVLQRFAGAKTQEASELKVMMENLVTDLLTTLNLPEYPASAPILEVLCV
LLLQNAGLKSKDVAARSMAIDLLGTIAARLKRDSLLCSRDKIWILQELVSDDGVDQTYPR
DACSVCLDGRVEKNVFVCQGCQRMFHADCMGVREYEVPNRSWHCQICLCRKQLLVLQSYC
KSQCKDEGIKDRSRSGRNTEVAFSITKPEVVQQMLLNYLQDTTSADDGQLFVRWFYLLLW
YKDDSKSQQKFMYYLARLKSKEIVRDSGTGFSLLTRDSVKKITLALAQKNSFSRGFDKIL
HLLLASLMENSPVIRAKALRAVSIIVEADPQVLGDKRVQSAVEGRFCDSAISAREAALEL
VGRHIASHPDVGLKYFEKVAERIKDTGVSVRKRSIKIIRDMCVSNANFSEFTSACIAIIS
RISDDESNIQDIVCKTFYEFWFEEPTGSQTQFFGDGSSVPLEVAKKTEQIVEMLRRMPSH
QPLVTVIKRNLALDFFPQSAKAVGINPASLASVRKRCELMCKCLLEKILQVEEMNIQEVE
RRALPYVLALHAFCVVDPKLCAPASDPSQFVVTLQPYLKSQADNRVVAQLVESIIFIIDA
VLPLVRKLPQAVVEELEQDLKNMIVRHSFLTVVHACIKCLCAVSKVAGKGAAIVENLIQV
FFKRLDAQAVDNKQQVGRSLFCLGLLIRYGNSLPSNSDKTIDVVSSLSLFKKYLLAEDFV
IKVRSLQALGFVLIARPKYMLEKDIGKIVEATFSSSSDVRLRMQALQNMYDYLLDAESQM
GTDAASDNVIHYNVEGGNAVSVAAGAGDTNICGGIVQLYWDNMLARCLDLNEQVRQSAIK
IVEVVLRQGLVHPITCVPYLIALETDPLEANSKLAHHLLMQMNEKYPAFFESRLGDGLQM
SFTFIQSISTSSEHENKKVQAKASGNAKGKSDSVSLAQGRLGVSRIYKLIRANRTSRNKF
LSSIVRKFDNASWTPSVVPFLMYCTEILALLPFTTPDEPLYLVYSINRVVQVRAGALEAK
LKALTLHLLQRGASHGNGIIEDGSAARPLTGGMASLDLNGTVQQEPVFQPVINYMSTEWN
GALQQERAYQSVSNQATPFEANMHVTGSSSSGGFSIDDVQKFQADCLAAIAVQLLLKLKR
HLKIVYSLNDARCQAFSPGEPPKPGEVLSRQNVPFDLSDTHTNLPTTYQELVQRYQEFKN
ALREDTIDFSTYTANIKRKRPAPRKGRKSVAGDDEGDDDDEDYSGGARRPSNIGRRGGYS
VRSRQRL
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccggtagtcacttcgagctcgagctccggctcggctcacggcggcatcagc
ctctccaacacggtgcactcggaggtcgcgccttgcttgcctctgccatcgctgccggtg
ttctgcggcgcatctgatcacctccggctgttcgacgagccgagtcggaacagcgcgtgg
ctgaaccgccctgatgcagctgttgcgagtaggattgctgatctgcttcgagtaaccgac
gtgtcgtacttgaaccttagggaggatgctggggcagttccatatgtttatggagaacct
ttaaaacttcacgatgtagttcttcagtacaatccagaagcctttgagtacaatagtcca
ggtcctattaaggggcaagtgcctgttagtagtacggtagctgacaagaagcccttcaag
cctagtatacctatactaaagccttctcaaagggactattccgtatctgacaataatcag
cttaatgatattcctcctaatgacatatctacaccatcttctagaaaacccaaatccaag
aaaaaagctagtgatgttatgtcatcagtgggaccagattctgctgaaattcaagatgcc
gccatcagaagcttttgtgagttggtggaggagttctgtggcagagctgaaattatcagt
gatgatcgggaagaaactgagtggttatctatgcctctttcggatcttagagtgcttgca
aatgaaataatgtctcttcgagcaaagaagcttctacatttggttcctgtagatactttt
gttagattgttaaggattttagatcatcagatacatcgagctgaaggcttgagtataatt
gaatatgagcagtcaaattcagatgtggtttcatcaatacaatgtgcattggaggccatt
cacgcagcattagcagtaatggctcataaccagatgccaaaacaactatataaagaagag
atcattgaaagaattctggagttttccaggcatcagataatggatgttatgtgtgcttat
gatccatcatatcgtgctttgcataggccaagtcaaaatgggtcgctcgaagttgaggaa
gatgaagagcctgatgctgaatttggctcagcaagcaagaagagacgcagtatcaagacc
gtgaaagtgcagaaatcctcatttaacagggtctctgctgctgtgaataatattcttcag
aaaatgtgcaccattcttggtttactcaaggatttgttgttaatagaaaggttatcagat
ggttgtatcttacaactagtgaaaacatgcttcacaacatttatggtggataatatccag
ctcttgcaactgaaggcaatgggtttgatcagtgggatattctattcatacactcagcat
cgcacatatgtgatagatgaattaattcagttgctttggaagttgccagtctcaaagcga
gctttgagagcctatcacctacctgacgaagagcaaaggcagattcagatgatcactgct
ttgctgattcagttggttcactatagtgcaaaccttcctgaatcattaaggcaggaatca
agtagtaattctatcttagaactctctgtcaatgccgattatccaactaaaggtcacgag
gcagcaacagaggcatgttgtcacttttggactcgtgtacttcagcgctttgctggtgca
aagactcaggaagcttcagagttgaaagtaatgatggagaatcttgttacagatctcttg
acaacattgaatttacctgaatatccggcttcagctcctattctggaggttctttgcgtc
ttgttactccagaatgctgggctgaaatctaaagacgtagctgcacgttcaatggctata
gaccttctcggcacaattgctgcaagattgaagcgtgattctctcctttgcagtagggac
aaaatctggatacttcaggagttggttagtgacgatggggttgatcagacatatccaaga
gatgcatgctcagtttgtttagatggtagggttgaaaaaaatgtctttgtttgtcaaggt
tgtcagagaatgtttcatgctgattgtatgggagtgagagaatatgaagttccaaatcga
agttggcactgtcagatatgcctctgcaggaagcaacttcttgttttacaatcctactgt
aagtcacaatgcaaagatgaaggaataaaggatcgaagtcgttcaggaagaaacactgaa
gttgctttttcaattacgaagcctgaggtagtccaacagatgcttttgaattaccttcaa
gataccacatcagctgatgatgggcagctctttgttcgctggttttatctcttgttgtgg
tacaaggatgattcgaaatcacagcagaagttcatgtactatcttgctagactgaaatca
aaagaaatagttcgggattctgggactggtttttcattattgacaagggattcagtcaag
aaaattactttagcattggcacaaaaaaactctttctccagagggtttgataagattctt
catttgcttttggcaagcttaatggagaattctcctgtaatcagggccaaggctttacga
gcggtcagtatcattgtagaagctgatccgcaggttttaggagacaaacgcgttcagtca
gctgttgaaggaaggttttgtgattccgcaatttccgctagagaagcagcactggagctt
gtaggaaggcatattgcttctcatcctgatgttggtttgaagtattttgagaaggttgct
gagagaattaaagatactggagtaagtgttcgaaagcgatctatcaaaatcatacgagat
atgtgcgtttcaaatgcaaatttctccgaatttacaagtgcttgcattgctatcatctcc
cgtattagtgatgatgaatcaaacatacaggatattgtttgcaagacattttatgagttc
tggtttgaggaacctactggttcacaaactcaattctttggagatggtagctctgttcca
ttggaggtggctaaaaaaactgaacagatcgttgagatgttgaggaggatgccaagtcac
cagcctcttgtgacagtcattaaacgcaacttggcccttgatttttttccacaatcagct
aaagctgttgggatcaaccctgcctcacttgcatcagtacgcaagcgctgtgagttaatg
tgcaagtgcttactggaaaagatattgcaggtagaggaaatgaatatccaggaggtagag
aggcgggcacttccgtatgtgctagctttgcatgcattctgtgttgtggatccaaagctt
tgtgcaccagcttctgacccttcacagtttgtggtcactcttcagccttatctaaagagt
caggctgataatcgagtggttgcacaattagtggagagtataatctttataattgatgct
gttcttccgttggtaagaaagttaccacaagctgttgtggaagaacttgaacaggactta
aagaacatgattgttcggcattccttcttgactgttgttcatgcttgcataaagtgcctg
tgtgctgtgagtaaagtggcaggaaaaggtgctgctatagtggagaatcttatccaggtg
ttcttcaaacgtttggatgctcaggcagtagataacaagcagcaagtggggcgatctctt
ttctgtcttggattgcttatccgttatggcaactctttgcccagtaactccgacaaaaca
attgatgttgttagcagtctcagcttgtttaaaaaatatcttctagcggaggattttgta
ataaaggttcggtcattgcaggcattgggctttgttctaatagctaggcccaaatatatg
ttggaaaaagatattgggaagatagtagaggcaacattctcttctagctctgatgttcgt
cttaggatgcaagcattgcaaaacatgtacgactatcttcttgatgccgaaagtcaaatg
ggaacagatgcggctagtgataatgtgattcattataatgtggaaggtggcaatgctgta
tctgttgctgcaggtgctggagatactaatatctgtggtggtatagttcagttgtattgg
gataacatgttggcaagatgtttagaccttaatgaacaagttcgccaatctgcaattaag
attgttgaagttgtactgcggcaggggctcgtacatcctattacatgcgttccatacctt
attgctctagaaacagatccactggaggccaattcgaagttagctcatcatttgctgatg
caaatgaatgaaaagtaccctgcatttttcgaaagccgcctgggagatggccttcaaatg
tcttttactttcatacagtccattagtacgagttctgaacacgagaacaaaaaagttcaa
gcaaaggcttctggaaatgcgaagggaaaatctgatagtgtttctctcgcacaaggcaga
cttggggtttctcgaatctacaagcttattcgtgctaaccggacttcaagaaacaaattt
ctgtcttcgattgttcgcaagtttgataatgctagctggacaccttcagtagtccctttc
ctgatgtactgcacagaaatactcgccttgctacccttcacaacaccggatgagccgctt
tatttggtctattctataaatagagtagtacaagttagggctggggcactcgaagcaaag
ctgaaagctctgactttgcatttgttacaaagaggtgcatctcatggcaacggcataatt
gaagatggctcagctgctcggcctcttacgggagggatggcatcattggacttgaatggg
acagttcaacaagaaccagtgtttcaacctgttataaattatatgtcaacggagtggaat
ggtgcattacaacaagagcgagcatatcagtctgtctccaatcaagctaccccgtttgag
gcaaacatgcatgttacgggctctagcagttccggtggcttctcaatagatgacgtacag
aaattccaggcggactgcctggcagctattgcagtgcagcttcttttgaaactgaagaga
cacctaaaaattgtgtatagcctgaatgatgcaaggtgccaggctttttctccgggtgaa
ccccctaaaccgggagaagtactctcgaggcagaacgttccttttgacctcagtgatacg
cacaccaatttgcctacaacttatcaagaattggtacaaagatatcaggaattcaagaat
gcattgagggaggatacgattgatttctctacttacactgcaaacatcaagagaaaacgc
ccggccccaagaaaaggacggaaatctgtggctggagacgatgagggcgatgatgatgat
gaggattattcaggtggggctcggaggccgagtaatattggaaggagaggtggctacagt
gtcagaagtcgacagcggttatag
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integrated database retrieval system
