Pseudomonas chlororaphis subsp. aurantiaca: JM49_00580
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Entry
JM49_00580 CDS
T03338
Name
(GenBank) transposase
KO
K07485
transposase
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JM49_00580
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Motif
Pfam:
DDE_Tnp_ISL3
HTH_Tnp_ISL3
Zn_ribbon_ISL3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIS10206
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Position
complement(126370..127575)
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AA seq
401 aa
AA seq
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MRDINTFLPFWEGFSVVTLKPEGDALQIDLVPHATRFPSCSNCQKPCSTTHEYCERTVRD
LPILGRAVRLSVLLRRVGCRDCGKRMEAVSWLDRYARMTRRLAEAVTQACERLPTLHVAQ
LFGLHWDTVRLLERRALQATLSALPKAQPRRLVMDEFALFKGHRYASVVLDADTRRVLWI
GEGRSRAAVRPFFEELGTEGCARIEAVAMDMNTAFDLEVRRHCPKARVVYDLFHVVAKYG
REVIDRVRVDEANRLRHDKPARKVIKQARWLLLRNPQNLKTPEQQVHLQDLLAANQALMT
VYLMKAELKMLWTPSTAWGWRSAWKQWLKHAHESAIPALLQFAKRLKGYWRGIVSRVRWP
MHTGQLEGINNRIKVIKRMAYGYRDSEFFFMKIKSVFPGNP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgagatattaatacgttccttcctttttgggagggcttttctgtcgtcaccctcaag
cctgagggtgatgctctacagatcgatctggttccccacgcgacccgattcccttcatgc
agcaactgccagaaaccctgctcaaccactcatgagtattgcgagcgaaccgttcgtgat
ttacccatcctcggccgtgcagtgcgtctgagcgtattgctcaggcgtgtgggttgccgt
gattgcggcaaacgcatggaagccgtcagttggctggatcgctatgcccgcatgacgcgc
cgcctggctgaggccgtcactcaagcctgcgagcgccttcccacgctgcacgtggctcaa
ctgtttgggctgcattgggacaccgttcgcttgctggagcgtcgagccttgcaagccacg
ttgagcgctttacccaaagcgcagccgcggcgcttggtgatggacgagtttgcgctcttc
aaaggtcatcgttacgccagcgttgtcctggatgccgatacacgacgcgtgctgtggatc
ggcgaaggccgcagccgtgcggcggtcaggccattcttcgaagagttgggaacagagggt
tgcgcccgaatcgaagcggtggcgatggacatgaacaccgcttttgacctggaggttcgc
cggcactgccccaaagcgcgcgtggtctacgacctcttccatgtggtggccaaatatggc
cgagaggtgattgatcgggtccgcgttgacgaggctaatcgactacgccacgacaagcct
gctcgtaaggtcatcaagcaagcgcgatggctactgctacgcaatccacagaatctgaaa
acgccggaacaacaggttcacttgcaggatttactggcggccaaccaagcgttgatgacg
gtctacttgatgaaggctgaactcaaaatgctctggacgccgagtactgcctggggctgg
agatcggcctggaagcaatggctcaagcatgctcatgagagcgcaataccggctctgctc
cagttcgccaaacggttgaagggttactggcggggcatcgtaagccgggttcgctggccg
atgcacacgggccaactggaaggcatcaacaatcgaatcaaagtcatcaagcggatggcg
tacggttaccgggacagcgagttctttttcatgaagatcaagagcgtctttcccggtaat
ccgtga
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